Sphingomonas rhizophila: H9L12_05600
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Entry
H9L12_05600 CDS
T07014
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhi03019
]
H9L12_05600 (rapZ)
Messenger RNA biogenesis [BR:
srhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H9L12_05600 (rapZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_29
AAA_16
AAA_18
nSTAND1
AAA_27
Aq_aa27
Zeta_toxin
AAA_22
AAA_23
SMC_N
AAA_21
AAA_28
IIGP
Motif
Other DBs
NCBI-ProteinID:
QNN65982
UniProt:
A0A7G9SDQ7
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All DBs
Position
1132694..1133623
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AA seq
309 aa
AA seq
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MDPARSLPRLLLVTGMSGAGKSSVLDALEDMGWDCVDNLPTALLHDFVHGEQSDDRVAPV
AVGMDVRSRGFDPDKLPDLLKSVEGVVPEILYLDCSGVELVRRYDETRRKHPLAEDRPAE
DGIARERALTAPLRQIADSLLDTTDLTPAELRDELVRRYGGDSRQPVITIASFGFSRGVS
RTADLMFDMRFLDNPHWIDSLRPLTGEDPAVQEHIRKDPSFAATMDRIEGLLTDLIPRYW
AAGKPYLAVAFGCTGGRHRSVAAAVDMAARLRAAGFPVNIRHRDLASPPSDTIEDDMARA
TGYAGGAGI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcgcggagcctgccgcgcctgctgctcgtcaccggcatgtccggcgccggc
aagtcgagcgtgctcgacgcgctggaagatatgggctgggactgcgtcgacaacctgccg
accgccctgctccacgacttcgtgcatggcgagcaatccgacgaccgcgtcgcgccggtg
gcggtcggcatggatgtccgcagccggggtttcgacccggataaactgccggacctgctc
aagtcggtcgagggcgtcgtccccgaaatcctttacctcgactgttcgggcgtcgaactc
gttcggcgctacgacgagacccgccgcaaacatccgctcgccgaggatcgcccggcggaa
gacggcattgcccgcgaacgggctttgacggcgccgcttcgccagatcgcggacagcctg
ctcgacacgaccgacctgacccccgccgagctgcgcgacgaattggtgcggcgctatggc
ggcgattcgcgtcagccggtcatcaccatcgcctcgttcggcttttcgcgcggcgtgtcg
cgcaccgccgacctgatgttcgacatgcgtttcctcgacaatccgcactggatcgactcg
ttgcgcccgctgacgggcgaggatcccgcagtgcaggaacacatccgcaaggacccgtcc
ttcgctgcgacgatggaccgcatcgaaggcctattaaccgacctcattccccgctattgg
gccgccggcaaaccttacctggcagttgcgttcggctgcacgggaggacggcatcgctcg
gtggctgctgcggtcgacatggccgcacggttgcgcgccgcggggtttccggtgaatatc
cgtcaccgtgaccttgcttcgcctcccagcgacacgatcgaagacgacatggcgcgcgct
accggatacgcgggtggcgctggcatttga
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