KEGG   Sphingomonas rhizophila: H9L12_05600
Entry
H9L12_05600       CDS       T07014                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
srhi  Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:srhi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srhi03019]
    H9L12_05600 (rapZ)
Messenger RNA biogenesis [BR:srhi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     H9L12_05600 (rapZ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_29 AAA_16 AAA_18 nSTAND1 AAA_27 Aq_aa27 Zeta_toxin AAA_22 AAA_23 SMC_N AAA_21 AAA_28 IIGP
Other DBs
NCBI-ProteinID: QNN65982
UniProt: A0A7G9SDQ7
LinkDB
Position
1132694..1133623
AA seq 309 aa
MDPARSLPRLLLVTGMSGAGKSSVLDALEDMGWDCVDNLPTALLHDFVHGEQSDDRVAPV
AVGMDVRSRGFDPDKLPDLLKSVEGVVPEILYLDCSGVELVRRYDETRRKHPLAEDRPAE
DGIARERALTAPLRQIADSLLDTTDLTPAELRDELVRRYGGDSRQPVITIASFGFSRGVS
RTADLMFDMRFLDNPHWIDSLRPLTGEDPAVQEHIRKDPSFAATMDRIEGLLTDLIPRYW
AAGKPYLAVAFGCTGGRHRSVAAAVDMAARLRAAGFPVNIRHRDLASPPSDTIEDDMARA
TGYAGGAGI
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatccggcgcggagcctgccgcgcctgctgctcgtcaccggcatgtccggcgccggc
aagtcgagcgtgctcgacgcgctggaagatatgggctgggactgcgtcgacaacctgccg
accgccctgctccacgacttcgtgcatggcgagcaatccgacgaccgcgtcgcgccggtg
gcggtcggcatggatgtccgcagccggggtttcgacccggataaactgccggacctgctc
aagtcggtcgagggcgtcgtccccgaaatcctttacctcgactgttcgggcgtcgaactc
gttcggcgctacgacgagacccgccgcaaacatccgctcgccgaggatcgcccggcggaa
gacggcattgcccgcgaacgggctttgacggcgccgcttcgccagatcgcggacagcctg
ctcgacacgaccgacctgacccccgccgagctgcgcgacgaattggtgcggcgctatggc
ggcgattcgcgtcagccggtcatcaccatcgcctcgttcggcttttcgcgcggcgtgtcg
cgcaccgccgacctgatgttcgacatgcgtttcctcgacaatccgcactggatcgactcg
ttgcgcccgctgacgggcgaggatcccgcagtgcaggaacacatccgcaaggacccgtcc
ttcgctgcgacgatggaccgcatcgaaggcctattaaccgacctcattccccgctattgg
gccgccggcaaaccttacctggcagttgcgttcggctgcacgggaggacggcatcgctcg
gtggctgctgcggtcgacatggccgcacggttgcgcgccgcggggtttccggtgaatatc
cgtcaccgtgaccttgcttcgcctcccagcgacacgatcgaagacgacatggcgcgcgct
accggatacgcgggtggcgctggcatttga

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