Sphingomonas rhizophila: H9L12_05665
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Entry
H9L12_05665 CDS
T07014
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi00300
Lysine biosynthesis
srhi00470
D-Amino acid metabolism
srhi01100
Metabolic pathways
srhi01110
Biosynthesis of secondary metabolites
srhi01120
Microbial metabolism in diverse environments
srhi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H9L12_05665
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H9L12_05665
Enzymes [BR:
srhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H9L12_05665
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNN65991
UniProt:
A0A7G9SDR6
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All DBs
Position
complement(1141576..1142805)
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AA seq
409 aa
AA seq
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MKPMGPIPDGFVPGPHGGLTISGEPAVGLFDRSGGTPLFVYDRSLIGRKIAQFRAVMPDN
VALHYAVKANPYAPLLEWLVSYVDGFDLASSGELATLERAGGLVLPVSFAGPGKRDTELT
QAIERGVTIHLESEGEADRALAIADRLGITPKLAVRVNPPFALKGAGMKMGGLASPFGVD
ADRVPALVCHLIDAGANWRGLHVYAGSQLLHAEPLIETQRLTVELAARIATEVGREPPEL
NLGGGFGIPYASTDIALDVDRVGQALGETLRAAPDILSSTRYAIELGRWLVGEAGVYLTR
VIDVKDSGGRRFAITDGGLQHMLAATGNFGQLLRRNYPIANAAKFGEESSQEVTVTGCLC
TPLDLLGDEVMLPPVGVGDIIAIFCAGAYGLSASPQNFLSQPVARELLL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatgggaccgatcccggatggcttcgttcccggtccgcacggcggcttgacg
atttctggcgagcctgccgttggcctcttcgaccgcagcggcggcacgcctttgtttgtt
tacgaccgcagcctcatcggtcgaaagatcgcccaattccgcgccgtcatgccggataac
gtcgctctgcattatgcagtaaaggcaaacccttacgccccactgcttgagtggcttgtc
agctatgtcgacgggttcgacctcgcgtcgagcggcgagttggcgacactggagcgggcc
ggtgggcttgtgctgccggtcagcttcgccggtccgggcaagcgcgataccgaactgacg
caggcgatcgagaggggtgtcacgatccacctggaaagtgagggggaagcggaccgggcc
ctggccatcgccgaccgcctggggatcacgcccaaactcgcggtcagggtcaatccgcct
tttgcgctgaagggcgcaggcatgaagatgggcgggctcgccagcccgttcggggtcgat
gccgatcgggtccctgcactggtctgtcacctgattgacgccggtgccaactggcgcggg
ctccacgtctatgccggtagccagctcctacatgccgaaccgctgatcgagacacagcgt
ttgaccgtcgagttggccgcccggatcgcaacggaggtcggtcgggagccgcccgagcta
aacctcggtggcggcttcggcatcccctacgcgtcgaccgacattgcgctggacgtcgac
cgcgtcggtcaggcgctcggcgagaccttgcgcgccgcgcccgacatcctttcaagcacg
cgctacgcgatcgaactgggacgctggctcgtgggcgaagcgggcgtctacctcactcga
gtgatcgacgtgaaggacagtggcgggcggcgattcgccatcaccgacggcggcctgcag
cacatgctcgccgcgacgggtaatttcgggcagctccttcgccgcaactacccgatcgcc
aacgcggccaaatttggcgaggagtcgtctcaagaagtcaccgtaacaggttgtctttgc
accccgctggacttgctgggcgacgaggtgatgctcccgccggtcggcgttggcgacatc
atcgccatcttttgcgccggtgcctacggcctcagcgcaagcccccaaaacttccttagc
cagcccgtcgcccgcgagttgctgctctag
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