Sphingomonas rhizophila: H9L12_06325
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Entry
H9L12_06325 CDS
T07014
Symbol
gcvPB
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPB
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi00260
Glycine, serine and threonine metabolism
srhi00630
Glyoxylate and dicarboxylate metabolism
srhi00670
One carbon pool by folate
srhi00785
Lipoic acid metabolism
srhi01100
Metabolic pathways
srhi01110
Biosynthesis of secondary metabolites
srhi01200
Carbon metabolism
Module
srhi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H9L12_06325 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H9L12_06325 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
H9L12_06325 (gcvPB)
00670 One carbon pool by folate
H9L12_06325 (gcvPB)
Enzymes [BR:
srhi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
H9L12_06325 (gcvPB)
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Motif
Pfam:
GcvP2_C
Aminotran_5
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QNN66087
UniProt:
A0A7G9SE12
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Position
complement(1256995..1258593)
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AA seq
532 aa
AA seq
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MTAVNPSGWRPATPVAGEGSATATVTGNRALMLEEPLLFEIGRRDQTGVDVAAAGEGESR
LGGLERGGVDLPGLSEPEAVRHYTRLSRQNYAIDLGLFPLGSCTMKHNPRLNEKIARLPG
FADIHPLQPKETVTGAIELINRLAFWLIDLTGMEGVAMSPKAGAHGELCGLLCIRAALEA
RGDARQVVLVPESAHGTNPATAAFCGYRVENIPATAAGRVDLEALKARLGPDVAAVMITN
PNTCGLFEPDMKAISDAVHAAGAFVYCDGANFNAVVGRVRPGDLGVDAMHINLHKTFSTP
HGGGGPGSGPVVLSKALCPYGPLPYTARYADGTVKLIEEEDAGEEMPDSFGRMVAFHGQM
GMFTRALSYILSHGADGLRQVAEDSVLNANYILRSLEDVLDAPFAHSGPCMHEAIFSDKG
FADGFSTIDVAKALIDEGFHPMTMYFPLVVHGAMLIEPTETESKANLDQFIAALRSIAER
ARAGDAALKEAPIYAPRRRLDETLAARKPVLAYRTPAPDGADSGEGAGIGGG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgtcaatccgtcgggctggcgcccggccacgccggtcgcgggcgaaggatcc
gccaccgcgaccgttaccggcaatcgcgcgctgatgctggaagaaccgctgctgttcgag
atcggacggcgcgaccagaccggcgtcgatgttgctgctgcgggcgagggcgaaagccgc
ctgggcggactggagcggggaggggtcgaccttccaggactcagcgagcccgaggcggtg
cgccactatacccgcctgtcgcgtcagaactacgccatcgacctcggcctgttcccgctc
gggtcgtgcacgatgaagcataatccgcggctcaacgagaagatcgctcggcttccgggc
ttcgcggacatccatccgctacagccgaaggaaacggtgaccggcgcgatcgagctgatc
aaccggctcgccttctggctgatcgacctgaccggcatggagggggtggcgatgagcccc
aaggccggcgcacacggcgaactgtgcggcttgctgtgcattcgcgccgcgctcgaggcc
cgcggcgatgcgcgacaggtcgtgctggtgcccgaaagcgctcacggcaccaatccggcg
acggcggccttctgcggatatcgggtcgagaatatcccggcgaccgcggcgggtcgggtc
gaccttgaagcgctcaaggctcggctgggtccggacgttgcggcggtgatgatcaccaac
cccaacacctgcggcctgttcgaaccggacatgaaggcgatcagcgatgccgtccacgcc
gccggtgcattcgtctattgcgacggtgcgaacttcaacgccgtcgtcggccgggttcgt
ccgggcgaccttggggtcgatgcgatgcacatcaacctgcacaagaccttttccactccg
cacggcggcggtggtcccgggtcggggccggtggtgctgtcgaaggcgctctgcccctac
ggcccgctgccctacacggcgcgctatgccgacggcacggtgaagctgatcgaggaagag
gatgccggcgaggaaatgccggacagcttcggccggatggttgccttccacggtcagatg
ggcatgttcacccgcgcgctgagctacatcctcagccacggcgccgacggccttcgtcag
gtcgccgaggacagcgtgctgaacgccaactacatcctgcgcagcctggaagacgtgctc
gacgcgccgttcgctcactcgggcccatgcatgcacgaagcgatcttcagcgataagggc
ttcgcggacggcttctcgacgatcgacgtcgccaaggcgctgatcgacgagggcttccat
ccgatgacaatgtacttcccgctcgtcgtccacggcgcgatgctgatcgagccgaccgag
accgaatccaaggccaacctcgaccagttcatcgccgcgctacgctcgatcgcggagcgg
gcgcgggcaggggatgcggcgctcaaggaagccccgatctacgcaccgcgacgccgcctt
gacgagacgctggccgcccgcaagccggtgcttgcctaccgaacgcctgcgcccgatggc
gccgacagtggcgagggggccggaatcgggggcggatga
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