Sphingomonas rhizophila: H9L12_06635
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Entry
H9L12_06635 CDS
T07014
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhi03009
]
H9L12_06635 (rimO)
Enzymes [BR:
srhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9L12_06635 (rimO)
Ribosome biogenesis [BR:
srhi03009
]
Prokaryotic type
ribosomal protein modification factors
H9L12_06635 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
QNN64084
UniProt:
A0A7G9S8A9
LinkDB
All DBs
Position
1314803..1316149
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AA seq
448 aa
AA seq
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MATTLPSPPRVGMVSLGCPKALVDSERILTKLRADGYEMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVVVTGCMGKEADVIRARFPDVLAITGPQQYEDVVAAVHEAAPP
VPNAYLDLVPEAGLKLTPRHYSYLKISEGCNHRCAFCIIPSIRGDLASRRPDAILREAEK
LVAAGTRELLVISQDTSAYGLDLRHASYPLKNGGEVRAHMTDLARELGRLRTPEGEQPWV
RLHYVYPYPHVDSVIPLMAEGLVLPYLDIPFQHASPRVLKAMRRPANEARVLERLRNWRA
EVPDIAIRSSFVVGFPGETEEDFQYLLDWLTEAQLDRVGAFRFEPVEGAAANNLPDPVPE
EVKEERYARIMELTARISTDKLAAKVGKTVDVLIDAVDGEGATGRSKADAPEIDGEVHLR
DAGHLKPGDFARVLVEDSDEHDLYGVAV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctactacccttccctccccgccgcgcgtcggcatggtttcgctcggctgtcccaag
gcgctggtcgacagcgaacgcatcctcaccaagcttcgcgccgacggctacgagatgtcg
cccgactatgccggcgccgacgtcgtgctcgtcaacacctgcggctttctcgattccgcg
aaggaagaaagcctcgaagcgatcggggaggcaattgccgagaacggccgcgtcgtcgtc
accggctgtatgggcaaggaggccgacgtcatccgcgcccgcttcccggacgtgctggcc
atcaccggaccccagcaatatgaggacgtggtcgccgcggtccacgaggccgctccacca
gtgcccaacgcctaccttgacttggtaccggaagcgggcctcaagctgacgccgcgccac
tacagctatctgaagatttcagagggctgcaaccaccgctgcgccttctgcatcatcccg
tcgatccgcggcgacctggccagccggcgccccgacgcaatcctccgcgaggccgaaaag
ctggttgcggcgggaaccagggaactgctggtcatcagccaggacaccagcgcctacggc
ctcgacctcaggcacgcctcctacccgctcaagaacggcggcgaagtgcgcgcgcacatg
accgacctggcccgcgagcttggccggctgcgcaccccggagggcgaacagccgtgggtt
cgactgcactatgtgtacccctatccgcatgtggacagcgtcatcccgctgatggccgag
gggctggtccttccctacctggacatcccgttccagcacgccagtccgcgcgtcctgaag
gcgatgcgtcgaccggccaatgaagcgagagtgctcgaacggcttcgcaactggcgcgcc
gaagtgcctgatatcgccatccgttcatctttcgtcgtgggctttcccggggagaccgag
gaagatttccagtacctgctcgactggctgaccgaagcgcagctcgaccgcgtcggtgcg
ttccgtttcgagccggtcgagggtgccgccgcgaacaacctgcccgatccggtgccggag
gaggttaaggaagagcgctatgcccggatcatggaactgacggcacggatcagtacggac
aagctggcggccaaggtcggcaagacggtcgacgtgctgatcgacgcggtcgacggcgaa
ggcgcgaccggccgaagcaaggccgatgcgccggagatcgatggcgaggtccacctgcgc
gatgcaggacatctcaagcccggcgatttcgcccgcgtgctggtcgaggacagcgacgag
cacgacctttacggggtcgccgtctag
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