Sphingomonas rhizophila: H9L12_06825
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Entry
H9L12_06825 CDS
T07014
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H9L12_06825 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhi03019
]
H9L12_06825 (rnc)
03009 Ribosome biogenesis [BR:
srhi03009
]
H9L12_06825 (rnc)
03036 Chromosome and associated proteins [BR:
srhi03036
]
H9L12_06825 (rnc)
Enzymes [BR:
srhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H9L12_06825 (rnc)
Messenger RNA biogenesis [BR:
srhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L12_06825 (rnc)
Ribosome biogenesis [BR:
srhi03009
]
Eukaryotic type
90S particles
RNase
H9L12_06825 (rnc)
Prokaryotic type
rRNA processing factors
H9L12_06825 (rnc)
Chromosome and associated proteins [BR:
srhi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H9L12_06825 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QNN64108
UniProt:
A0A7G9S8D3
LinkDB
All DBs
Position
1351092..1351754
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AA seq
220 aa
AA seq
DB search
MSDTAAFLTEALGIEPRDAALYERARTHGSRGGDSYERLEFLGDRVLGLLVSEWLYERFP
DEPEGKLSRRYNALVARETCAEVGRAIGLPPHIRLGKQAREDLANLSENVIGDVVEALLG
AVYLEHGLDAARAIVRKHWSPFLDVQKRAPVHPKSALQELAAARNLGVPVYEMLARFGPH
HAPRFRVKVSLGRHGEAEAEGDNKQEAETAAAAMLVERLS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacagccgccttcctgaccgaagcgctcgggatcgagccacgcgacgcagca
ctctacgaacgcgctcggacccatggcagccgcggcggcgacagctacgaacgactggaa
ttcctcggcgaccgggtgcttgggttgttggtctcggaatggctgtacgagcgctttcct
gacgagcccgagggcaagctcagccggcgctacaacgcgctggtggcccgcgagacttgc
gccgaagtcggccgggcgatcggccttccgcctcacatccgcctcggcaagcaagcgcgc
gaggatctcgccaatctcagcgagaacgtcatcggcgacgttgtcgaggccctgctcggc
gcggtctatcttgaacatggcctcgatgccgccagggccatcgtccgcaagcattggtcg
ccgttcctcgacgtccagaagcgcgcgccggtgcaccccaagtccgcgcttcaggaattg
gccgcggcccgaaaccttggagttcccgtctatgaaatgcttgcccgcttcggtccgcat
cacgccccgcgtttccgcgtgaaggtgtcattgggccgtcacggggaggcggaagccgag
ggcgacaacaagcaggaggcggagaccgccgccgccgcgatgctggtggagcgcctgtca
tga
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