Sphingomonas rhizophila: H9L12_07445
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Entry
H9L12_07445 CDS
T07014
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi03420
Nucleotide excision repair
srhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L12_07445
03430 Mismatch repair
H9L12_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_07445
Enzymes [BR:
srhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L12_07445
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L12_07445
MMR (mismatch excision repair)
Other MMR factors
H9L12_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
EcoEI_R_C
Motif
Other DBs
NCBI-ProteinID:
QNN64208
UniProt:
A0A7G9S8N3
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All DBs
Position
1459244..1461610
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AA seq
788 aa
AA seq
DB search
MLVCGRLDNRVAAAVAVSFPPSYLHPVPESPALTPDPAYLNGLNPPQREAVLTTEGPVLM
LAGAGTGKTAALTARLAHIIATRRAWPSQILAVTFTNKAAREMKERVSHISGGAIEGMPW
LGTFHSVAARMLRVHAELVGLQSNFTILDTDDQIRLLKQLIVAVNLDEKRWPARQLAGLI
DRWKNRGWTPKEIDAAESEAFANGRGQEMYAAYQARLVALNACDFGDLLLHTLTIFKKHD
DVLEKYRDRFRYILVDEYQDTNASQYEWLRLLAEPRRNICCVGDDDQSIYSWRGAEVANI
LRFEKDFPGAAVIRLEQNYRSTPHILGAATGLIAHNAGRLGKTLWTEVDAGDPVKVIGVW
DGPEEARRIGEEIEAHQRRGGSLDDTAILVRAQFQTREFEERFIAIGLAYQIVGGFRFYE
RAEIRDALAYLRLVAQPADDLAFERIVNVPKRGLGDKAVANIHAFARATSQPLLMAAAQM
LDSDELTPQARRSLGRFVGDLARWRQMASELPHPELARILLDESGYTAALQAERTAEAAG
RLENLAELTRAMEEYETLGAFLEHVSLVMDNDAQRGEPKVTIMTIHAAKGLEFPIVFLAG
WEEGVFPSQRALDEGGLASLEEERRLAYVAITRARRQATILHAANRRIYGQWTSSIPSRF
VGELPKEHIEEETTMSGGESLWRAQWSERGDPFAHLAAAQSTRASTRGPGWQRAAGGNFS
TQQPRVIEARASAVSLGNKGRDDLTVGMRVFHGKFGYGTIEAIEGNKLEIEFEKAGHKRV
LDSFVSIG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttggtctgcggtcgcctggataaccgagtcgccgcagcggttgccgtttcgttcccc
ccgtcctacctccaccccgtgcccgaatcccctgccctgacgcccgatcccgcatacctg
aacggcctcaacccgccgcagcgcgaggcggtgctgaccaccgagggaccggtcctgatg
ctggccggcgcgggaacgggcaagaccgcggcgctgaccgcgcgccttgcccatatcatc
gccacccgccgtgcctggccgtcgcaaatcctggccgtcaccttcaccaacaaggcggcg
cgcgagatgaaggaacgcgtgtcgcatatcagcggcggggcgatcgagggcatgccctgg
ctcggcacattccactcggtcgcagcgcggatgctccgggtccacgccgagttggtcggg
ctacagtcgaacttcacgattctcgataccgacgaccaaatccggctgctcaagcagttg
atcgtagccgtgaacctcgacgagaaacgctggccggcgcggcagctggccggactgatc
gaccgctggaagaaccgtggctggaccccgaaagagatcgacgcggcggagagcgaggcc
ttcgcgaacggccgcggccaggaaatgtatgccgcctaccaggcgcggctggtcgcgctc
aacgcctgcgacttcggcgacctgctgctccacacgctgaccatcttcaagaagcacgac
gacgtgctggaaaagtaccgcgatcgcttccgctacatcctggtcgacgaatatcaggac
accaatgccagccagtatgaatggctgcgcctgctcgccgagccacgccgcaatatctgc
tgcgtcggcgacgacgaccagtcgatctactcatggcgcggagcagaagtcgccaacatc
ctgcggttcgaaaaggattttcccggcgccgcggtgatccggctggaacagaattaccgc
tcgacgccgcacatcctcggcgccgccaccggcctcatcgcccacaacgccgggcggctc
ggcaagacgttgtggaccgaggtcgacgccggcgacccggtcaaggtcatcggcgtgtgg
gacgggcccgaggaagcgcgccgcatcggcgaggagatcgaggcgcaccagcggcgcggc
ggatcgctcgacgataccgccatcctcgtccgcgcccagttccagacgcgcgaattcgaa
gagcggttcattgccatcggtctcgcctaccagatcgtcggcggcttccgattctacgag
cgggcggaaatccgcgacgccctcgcttaccttcgcctcgtcgcgcaaccggcggacgac
ctcgccttcgaacgcatcgtcaacgtccccaagcgcggcctcggcgacaaggccgtcgcc
aacatccacgccttcgcccgcgccacatcgcagcccctgctgatggccgcagcgcaaatg
ctcgacagcgacgagttgaccccgcaggctcggcgcagcctcggccgcttcgtcggcgac
ctcgcccgctggcggcagatggcaagcgagctgccgcatccggagctcgcccgaatcctg
ctcgacgagagcggctacacggcggcgcttcaggcggagcgcacggccgaggcggccgga
cggctcgagaacctcgccgaactgacccgcgcgatggaggaatatgagacgctcggcgcg
ttcctcgagcatgtcagcctggtgatggacaatgacgcccagcgcggcgagcccaaggtc
acgatcatgaccattcacgccgccaaggggctggaattcccgatcgtgttcctggccggt
tgggaagaaggcgtgttcccgtcgcagcgcgcgctcgacgagggcggtctcgccagcctc
gaggaagaacgccgcctagcctatgtcgcgattactcgcgcccggcgccaggcgaccatc
ctccacgccgccaaccgccgcatctacggtcagtggacctcctcgatccccagccgcttc
gtcggcgagctgcccaaggagcatatcgaggaagagaccaccatgtcgggcggcgaaagc
ctgtggcgcgcgcaatggagcgagcgcggcgatccgttcgcccacctcgccgcggcgcaa
tcgacgcgcgcctccacgcgcggtccgggatggcagcgcgccgcgggcggcaatttctcg
acccagcagccgcgggtgatcgaggcgcgggcctcggccgtcagcctcggcaacaagggc
cgcgacgacctgacggtcggcatgcgcgtgttccacgggaaattcggctacggcacgatc
gaggcgatcgagggcaacaagctggaaatcgagttcgagaaagccgggcacaagcgcgtc
ctcgacagcttcgtcagcattggttga
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