Sphingomonas rhizophila: H9L12_07595
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Entry
H9L12_07595 CDS
T07014
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhi03032
]
H9L12_07595
03036 Chromosome and associated proteins [BR:
srhi03036
]
H9L12_07595
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_07595
DNA replication proteins [BR:
srhi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H9L12_07595
Chromosome and associated proteins [BR:
srhi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H9L12_07595
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H9L12_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QNN64232
UniProt:
A0A7G9S8Q7
LinkDB
All DBs
Position
complement(1485832..1486128)
Genome browser
AA seq
98 aa
AA seq
DB search
MIRSELVQKLCEEFPDLTQREVENVVGSLFDSITEQLAKGGRVELRGFGAFSTRQRDART
GRNPRTGAAVAVDAKRVPYFKPGKEMRERLNLGEVTAE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttccgagctcgtccagaagctttgcgaagagtttccggacctcacccagcgt
gaagtcgagaatgtcgtgggatcgctgttcgattcgatcacggagcagctcgccaagggc
ggccgcgtcgagcttcgcggcttcggtgctttttcgacccgccagcgcgatgcgcgcacc
ggccgcaatccgcgcaccggtgctgcggtggcggtggacgccaagcgcgtgccctatttc
aagccgggcaaggaaatgcgcgagcgcttgaacttaggcgaggtcaccgccgaataa
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integrated database retrieval system
