Sphingomonas rhizophila: H9L12_07930
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Entry
H9L12_07930 CDS
T07014
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srhi01002
]
H9L12_07930
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhi01011
]
H9L12_07930
Peptidases and inhibitors [BR:
srhi01002
]
Cysteine peptidases
Family C82
H9L12_07930
Peptidoglycan biosynthesis and degradation proteins [BR:
srhi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H9L12_07930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QNN64282
UniProt:
A0A7G9S8V7
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All DBs
Position
complement(1551354..1552697)
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AA seq
447 aa
AA seq
DB search
MNFPSIQSSPTAIAVKLMIAAGVAFGSASPSIAAAAPNAVTAAVQNDIDAFYQSRAYRPL
WLSTGNFSGGEALLELFESASLDGVDSDLIERKAVRRAMTRAQSGDPEAIFRADRLLSEN
FVRYVRAMRTVNPVTSGWEINDRELMPRAPAAAEVLADAARYGSAAAYVGDIAWMNPVYG
ELRQALINARTFGEGAQSQIIRANMERARILPGRSAGRYVLVNIASQQLEMWENGKVVGS
MKVVVGKPDMPTPQMAALIRYTAVNPYWNLPPDLVAERVAPNVLKDGQSYLAKKGYVVLS
DWSDNPSKVSPTEVDWNQVAAGKVQLRMRQNPGVANAMGKMKFMFPNPKGVYLHDTPQKD
LMAGDSRLYSAGCVRLESAPKLAKWLYGRPLNTKGAKPEQRVDLDAPVPVYLAYLTAMPQ
GSQVAFYEDIYRRDSQAMAAINYGGSN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcccgtcaatccaatccagcccgacggcgatcgccgtcaagctgatgattgct
gcgggagtcgcgttcggaagcgcttccccttcgatcgcggctgcggcgcccaatgccgtg
accgcggcggtccagaacgacatcgacgccttctatcagtcgcgcgcctatcgtccgctc
tggttgagcaccggcaacttctcgggcggggaagccttgctcgaactgttcgaatccgcg
tcgctcgacggcgtcgatagcgacctgatcgagcgcaaggctgttcgccgcgcgatgacc
cgcgcacagagcggcgatccggaggcgattttccgcgccgaccgtttgctgagcgagaat
ttcgttcgctacgttcgggccatgcggacggtgaatccggtcacgagcggctgggaaatc
aacgaccgcgaactgatgccgcgtgccccggccgcggccgaggttcttgccgatgccgcc
cgttacgggtcggccgcggcctatgtcggcgacatcgcgtggatgaacccggtgtatggc
gagcttcgccaggcgctgatcaatgcgcgcacgtttggcgaaggcgcccagtcgcagatc
atccgcgcgaacatggaacgcgcccgcattctccccggtcgttcggccggccgctacgtg
ctcgtcaacatcgccagccagcagctggagatgtgggagaacggcaaggtcgtcgggtcg
atgaaggtggttgtcggaaagcccgacatgccgaccccgcagatggcggccctcatccgc
tacacggcggtcaatccgtactggaaccttccgcccgacctggtcgcggaacgcgttgcg
ccgaacgttctgaaggatggccagagctacctggcgaagaagggctatgtcgtactgtcc
gactggtccgataatcccagcaaggtcagcccgaccgaagtcgactggaaccaggttgcg
gctggtaaggtgcagcttcgcatgcggcagaacccgggcgtcgcgaacgcgatggggaag
atgaagttcatgttcccgaaccccaagggcgtttacctgcacgacacgccacagaaagac
ctgatggccggcgacagccgcctgtacagtgccggctgcgtccgccttgaatcggcacca
aagctggcgaagtggctttatggccgcccgctcaacaccaagggcgccaagccggaacag
cgggtcgatctcgacgcgccggtccccgtctatctcgcctacctgacggccatgccgcag
ggtagccaggtggcgttctacgaagacatctaccgtcgcgactcccaagcgatggcggcg
atcaactacggcggatcgaactga
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