Sphingomonas rhizophila: H9L12_09225
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Entry
H9L12_09225 CDS
T07014
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_09225
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
H9L12_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_10
AAA_22
TrwB_AAD_bind
T2SSE
AAA_7
AAA_19
AAA_16
Hydrolase
Zot
TsaE
Motif
Other DBs
NCBI-ProteinID:
QNN64495
UniProt:
A0A7G9S9H0
LinkDB
All DBs
Position
complement(1790145..1791785)
Genome browser
AA seq
546 aa
AA seq
DB search
MATNPTTGIFIGAGAGGTNPQQLELKRANRHGLIAGATGTGKTVTLQGIVESLSKVGVPT
FVADVKGDLSGLAMPGDPNAKTGEIFRQRAAEIGLADYTLEACPVQFWDLFGEQGHPIRT
TVSEMGPLLLARLMNLNEVQEGVLTIAFTVADKDGLLLLDLDDLQSLLVHCGEKADELTL
EYGNVSKPSVGAIQRSLLQLRAQGGDHFFGEPALDLDDFIALDDSGRGIVNILAADKLMS
SPRLYATFLLWLLSELFEMLPEIGDPDKPKLAFFFDEAHLLFDDAPPALMEKVEQVVRLI
RSKGVGVYFITQNPIDIPDKIAAQLNNRVQHKLNAFTPRDQAAVKAAADTFRSNPDIDVA
SAITELKIGEALVSLLQPDGSPSPVQRTLIRPPSSRVGPLSAQERQVIVTTDAVGDRYDQ
LVDRDSAEEILQAKAGEAAAAAAAAAAETAAAKQAAEDAKTQAQAAKAEAQAKAAALRQQ
AAEERLAAQRQREADRVAAREAREAAKPTMTDKILQSAVRSASSSVGRQLGNQLLRGILG
GLFRGR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacccgacgacgggcatcttcatcggtgcgggtgccggcggcaccaatccg
cagcagctagagctcaagcgtgccaaccgccatgggctgatcgccggggcgacgggcacc
ggcaagacggtgaccctgcaaggtatcgtcgagagcctcagcaaggtcggcgtcccgacc
ttcgtcgccgacgtgaagggcgacttgtcgggcctcgccatgcccggtgaccccaatgcc
aagaccggcgaaatcttccgccagcgcgcggccgaaatcggccttgccgactatacgctc
gaggcctgcccggtgcagttctgggacctgttcggcgagcagggacaccctatccgcacc
accgtcagcgagatgggcccgctgctgctcgccaggttgatgaatctcaacgaggtgcag
gaaggcgttttgaccatcgccttcaccgtcgccgacaaggacggcctgctgctgctcgac
ctcgacgacctccagtcgctgctggtccattgcggagagaaggccgacgagctgacgctc
gagtacggcaacgtgtcgaagccttcggtgggcgcgatccagcgttcgctgctccagctt
cgggcgcagggcggcgaccatttcttcggcgaacccgccctcgacctcgacgatttcatc
gcgctcgacgacagcgggcggggcatcgtcaacatcctcgccgccgacaagctgatgtcc
tcgccgcggctctacgccaccttcctgctgtggctgctcagcgaactgttcgagatgctt
ccggaaatcggcgatccggacaagccgaagctcgccttcttcttcgacgaggcccacctg
ttgttcgacgatgcgccgccggcgctgatggaaaaggtcgaacaggtcgtgcgcctgatc
cgctccaagggtgtcggcgtctattttatcacgcagaacccgatcgacattcccgacaag
attgcggcgcagctcaacaatcgggtccagcacaagctcaacgccttcaccccgcgtgac
caggcggcagtcaaggcggcggcggacaccttccggtccaaccccgacatcgacgtcgcc
agcgcgatcaccgaactcaagatcggcgaggcgctggtgtcgttgctgcagcccgacggt
tcgccgtctccggttcagcgcacgctgatccggccgccgtcgtcgagggtcggtccgctg
tccgcccaggagcggcaggtcatcgtcacgaccgacgccgtcggcgacaggtacgaccaa
ctggtcgatcgcgattccgccgaggagatccttcaggccaaggcgggtgaggccgccgcc
gccgccgctgcagccgccgccgaaaccgccgccgccaagcaggcggcggaggacgccaag
acgcaggcccaggctgccaaggccgaggcccaggccaaggccgcagcgcttcgccagcag
gcggccgaggaacggctcgccgcccagcgccagcgcgaggcggaccgcgtcgcagcccgc
gaggcgcgcgaggccgccaagccgaccatgaccgacaaaatcctccagtccgcggtgcgc
tcggcatcgagctcggtcgggcgccagctcggcaaccagttgcttcgcggcatcctcggc
ggacttttccgtgggcgctga
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