Sphingomonas rhizophila: H9L12_09380
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Entry
H9L12_09380 CDS
T07014
Name
(GenBank) HAMP domain-containing protein
Organism
srhi
Sphingomonas rhizophila
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
OmpH
Motif
Other DBs
NCBI-ProteinID:
QNN64520
UniProt:
A0A7G9S9J5
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All DBs
Position
1821286..1826658
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AA seq
1790 aa
AA seq
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MNKQAARNEFGVSRRDLINALRRLRKGDFAVRLSEDGSTEDSEIAILFNEVVSLNQNITE
EFERLAKIVGKEGKIGHRAKVRGATGGWDTKLRAVNELIDDMVQPTTEVARVIGSVAKGD
LSQMMAVETDGRPLRGEFLRIGKVVNTMVAQLGSFASEVTRVAREVGTEGKLGGQANVKG
VAGTWKDLTDNVNLMAANLTGQVRNIADVTTAVARGDLSKKITVDVKGEILELKNTINTM
VDQLNSFASEVTRVAREVGTEGRLGGQAQVEGVGGTWKDLTDNVNAMAGNLTGQVRNIAE
VTTAVASGDLSKKITVEVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQA
QVRGVAGTWKDLTDNVNLMADNLTGQVRNIAEVTTAVASGDLSKKITVDVKGEILELKNT
INVMVDQLNGFASEVTRVAREVGTEGKLGGQAQVPGVAGTWADLTDNVNLMAANLTGQVR
NIAEVTTAVARGDLSKKITVDVKGEILELKDTINVMVDQLNSFASEVTRVAREVGTEGRL
GGQAQVEGVGGTWKDLTDNVNAMAANLTGQVRNIAEVTTAVARGDLSKKITVDVKGEILE
LKNTINVMVDQLNSFASEVTRVAREVGTEGRLGGQAQVEGVGGTWKDLTDNVNAMAGNLT
GQVRNIAEVTTAVALGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGT
EGKLGGQAQVRGVAGTWADLTDNVNLMADNLTGQVRNIADVTTAVARGDLSKKITVDVKG
EILELKNTINTMVDQLNGFASEVTRVAREVGTEGKLGGQAQVPGVGGTWKDLTDNVNLMA
TNLTNQVRGIADVVTAVAQGNLKRKLTFDAKGEIAALAETINGMIETLSTFGDQVTNMAR
EVGVEGRLGGQARVPGAAGLWRDLTDNVNQLAANLTNQVRSIAEVATAVTKGDLTRSIAV
EASGEMAALKDNINEMIGNLKDQTLKNAEQDWLKTNLARFSRMLQGERDLTTISNLIMSE
LAPLVNAQYGVFYVTNRDEDEVKLDLVASYGADSRSQLQQQFELREGLIGQAAANKRPMR
LSSVPGDFIKIGSGLGKAAPANINILPALFEDEVKAVIELASFEEFNETHHSFLNQLMET
VGIVLNTIAATMRTEELLKESQLLTQELQARQTELTTKQEELHNTNEELQEKAQLLENEK
RQVEAKNFEIEMARRAVEEKAEQLALTSKYKSEFLANMSHELRTPLNSLLILSKLLADNQ
QGNLNEKQTEFARTIHGAGTDLLNLINDILDLSKIESGTVSIELAEMPTAGLKQHMERTF
RQLASEKGLQFEVDFADTLPPTILTDEKRLQQVVLNLLSNAFKFTAQGGVTLAVRPAHSG
WSPDHPILREGQDAIEISVSDTGIGIPDDKQKLIFEAFQQADGTTSRKYGGTGLGLSISR
EIARLLGGELQVRSVIGEGSTFTLFIPTRATDGRMAALPAPAVINSSEPVAQGIALPDDR
DALNGEPFVLIVEDDATFASILIDLAHDAGLKAVVSSSGSGTVAMVRKLRPNAVTLDLGL
SDIDGFVLLDLLSHDPDTAGIPVHVISGAEQATHALTIGAAGITEKPASHEVLKDLFAKI
AKTPRAAGRKARPRPKSETSERRDPVPELAGTRILIVDDDIRNIYSLTSVLEAHDVKVLH
AERGAEGIEILETAPMIDAALVDIMMPDMDGYETMRRIRSKPAIANIPLIAVTAKAMKGD
RQKCLDAGASDYISKPVDIDLLLALLRVWIGRSKSDRKPVKSRSAPSKVA
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcaagccgcgcgcaatgaattcggcgtcagccgccgggacctcatcaatgcg
cttcgccgccttcgaaagggcgattttgcggtccgcctgtcggaagacggttcgaccgag
gacagcgagatcgcgatcctgttcaacgaagtcgtttcgctcaatcagaacatcaccgag
gaattcgaacggctggccaaaatcgtcggcaaggaaggcaagatcggccaccgcgccaag
gttcgcggcgcaaccggcgggtgggacacgaagcttcgcgcggtcaacgagctgatcgac
gacatggtccagccgacgaccgaggtcgcgcgcgtcatcgggtcggtggccaagggcgac
ttgtcgcagatgatggcggtggagaccgacgggcgcccgctccgcggcgaattcctgcgc
atcggcaaggtcgtcaacaccatggttgcgcagctcgggtcgttcgcgtcggaagtgacc
cgcgtggcccgcgaagtcggtaccgaaggaaagctcggcgggcaggcgaacgtgaagggc
gtcgccggcacatggaaggacctcaccgacaacgtgaacctgatggccgcgaacctgacc
ggccaggtgcgcaacatcgccgacgtgacgaccgccgtggcgcgcggcgacttgtccaag
aagatcaccgtggacgtgaagggtgaaatcctggagctgaagaacaccatcaacacgatg
gtcgaccagctcaattcgtttgcgtccgaagtgacccgcgtggcccgcgaagtcggcacc
gagggacgcctcggcggccaggcgcaggtcgagggcgtcggcggcacgtggaaagacctc
accgacaatgtgaacgccatggccggcaaccttaccggccaggtccgcaatatcgccgaa
gtgaccaccgcggtcgcctcgggcgacttgtcgaagaaaatcaccgtcgaggtgaagggc
gaaatcctcgagctgaagaacaccatcaacaccatggtggaccagctgaactcgttcgcg
tccgaagtgacgcgcgtggctcgagaagtgggcaccgagggcaagctcggcggccaggcg
caggtgcgcggcgtcgccggcacgtggaaggatttgaccgacaatgtgaacctgatggcc
gacaacctgaccggccaggttcgcaacatcgccgaggtgacgaccgcggtcgcctcgggc
gatctttcgaaaaagatcaccgtcgacgtgaagggcgagatcctcgagctgaagaacacg
atcaacgtcatggtcgaccagctcaacggcttcgcgtcggaagtgacccgcgtggcgcgc
gaggtcggtaccgaggggaagctcggcggccaggcgcaggtccccggggtcgccggtacc
tgggccgacctgaccgacaatgtgaacctgatggccgccaacctcaccggacaggtccgc
aacatcgccgaggtgaccaccgccgtggcgcgcggcgacttgtccaagaagatcaccgtc
gacgtgaagggcgaaatccttgaactcaaggacacgatcaacgtcatggtcgaccagctc
aacagcttcgcgtccgaagtcacccgcgtggcgcgcgaagtcggcaccgaggggcgcctc
ggcgggcaggcccaggtcgagggcgtcggtggcacgtggaaggacctcaccgacaatgtg
aacgccatggccgcgaacctgaccggccaggtgcgcaatatcgccgaggtgaccaccgcc
gtggcgcgcggcgacttgtccaagaagattaccgtcgacgtgaagggcgaaatcctcgag
ctgaaaaacaccatcaacgtcatggtcgaccagctgaactcgttcgcgtccgaagtgact
cgcgtggcgcgtgaagtcggcaccgaaggccgcctcggcggacaggcgcaggtcgaaggc
gtcggcgggacgtggaaagacctcaccgacaatgtgaacgccatggccggcaatctcacc
ggtcaggtccgcaacatcgccgaggtgacgaccgccgtcgcgctcggcgacttgtccaag
aagatcaccgtcgacgttaagggcgaaatcctcgagctcaagaacaccatcaacacgatg
gtggaccagttgaactccttcgcgtcggaagtgacccgcgtggcccgcgaagtgggtacg
gaaggaaagctcggcggtcaggcgcaagtccgcggcgtcgccggcacctgggccgacctg
accgacaatgtgaacctgatggccgacaacctgaccggccaggtgcgtaacatcgccgac
gtgacgaccgcagtggcgcgcggcgacctttcgaaaaagatcaccgtcgacgtgaagggc
gagatcctcgagctcaagaataccatcaacaccatggtcgaccagctcaacggcttcgcg
tccgaggtgacccgcgtggcgcgcgaagtgggcaccgaggggaagctcggcggccaggcg
caggtgccgggcgtcggcggcacgtggaaggacctgaccgacaacgtcaacctgatggcg
accaacctgaccaaccaggtgcgcggcatcgccgacgtcgtcaccgcggtggcgcagggc
aatctgaagcgcaagctgacgttcgatgcgaagggcgagatcgcggcgctggccgaaacc
atcaacggcatgatcgaaacgctgtcgaccttcggtgaccaggttaccaacatggcccgc
gaggtcggcgtcgagggccggctgggcggacaggcgcgcgtgcccggcgcggccggcctg
tggcgcgacctgaccgacaacgtcaaccagctcgccgccaacctgaccaaccaggtccgc
tcgatcgccgaagtggcgaccgccgtgaccaagggtgaccttacccgatcgatcgcggtg
gaagcgtccggcgaaatggccgcgctcaaggacaacatcaacgagatgatcggcaatctg
aaggatcagacgctcaagaatgccgagcaggactggctcaagaccaacctcgcccgcttc
agccggatgctgcagggcgaacgcgacctcaccaccatttccaacctcatcatgtcggaa
ctggcgccgctggtgaacgcgcaatacggcgtcttctacgtcaccaaccgcgacgaggac
gaagtcaagctcgacctcgtcgccagttacggcgccgacagccggtcgcaattgcagcag
cagttcgaacttcgcgagggcctgatcgggcaggcggcggcgaacaagcggccgatgcgc
ctgtcgagcgtgccgggggatttcatcaagatcggatcgggcctcggcaaggcggcgccc
gccaacatcaacatcctcccggccctgttcgaggacgaggtcaaggcggtcatcgaactc
gcctcgttcgaggaattcaacgagacgcaccacagcttcctcaaccagctgatggaaacg
gtcggcatcgtgctcaacaccatcgccgcgacgatgcggacggaagaactgctcaaggaa
tcgcagctgctgacgcaggagctccaggctcgccagaccgagctcaccaccaagcaggaa
gaactgcacaacaccaacgaggagttgcaggaaaaggcccagctactggagaacgagaag
cgtcaggtcgaagccaagaatttcgaaatcgaaatggcccgccgcgcggtcgaggaaaag
gcggagcagctcgccctcacctccaagtacaagtccgaattcctcgccaacatgagccac
gagttgcgcacgccgctgaactcgcttctgatcctgtcgaagctgctggccgacaaccag
cagggcaacctcaacgagaagcagaccgagttcgcgcgcaccattcacggcgcgggcacc
gacctgctcaatctcatcaacgacatcctcgacctgtcgaagatcgaatccggcaccgtg
tcgatcgagctcgccgaaatgccgaccgccggactcaagcagcacatggaacggacgttc
cgacagctcgcgtctgaaaagggtcttcagttcgaagtcgacttcgccgacacgctcccg
ccgaccatcctcaccgacgaaaagcgcctgcagcaggttgtgctcaacctgctgtccaat
gccttcaagttcaccgcgcagggcggcgttaccctcgccgtccggccggcgcattccgga
tggagcccggaccacccgattcttcgcgagggccaggacgcgatcgagatttcggtcagc
gacaccggcatcggcattcccgacgacaagcagaagctgatcttcgaggccttccaacaa
gcggacggcaccaccagccgcaaatatggcggtaccggcctcggcctgtcgatcagccgc
gagatcgcccgcctgctcggcggcgaattgcaggtccggtcggtcatcggcgaaggatcc
accttcaccctgttcatcccgacgcgcgccacggacgggcggatggccgcgctgccggcc
ccggccgtcatcaacagcagcgaaccggtcgctcaaggaatcgcgctgcctgatgaccgc
gatgcgctgaatggcgagccgttcgtcctgatcgtcgaggacgacgcgaccttcgcgtct
atccttatcgacctggcccacgacgccggactgaaggcggtggtgtcgagcagcggttcg
ggcaccgtcgcgatggtgcgcaagcttcggccgaacgcggtgacgctcgacctcggcctg
tccgacatcgacggtttcgtgcttctcgacctgctgagccacgaccccgacaccgccggc
atcccggtccacgtcatttccggcgcggagcaggcgacgcacgcgctgaccatcggcgcg
gcgggcatcacggagaaacccgccagccacgaagtgctgaaggacttgttcgcgaagatt
gccaaaaccccgcgcgcggccggacgaaaagccaggccgagaccgaaatccgagaccagc
gaacgccgcgaccccgtgcccgaactggccggcacgcggatcctcatcgtcgacgacgac
atccgcaacatctactcgctgaccagcgtgctcgaggcgcacgacgtcaaggtgctgcac
gccgaacgcggcgcggaagggatcgagatcctggagaccgcgccgatgatcgacgcggcc
ctggtcgacatcatgatgccggacatggacggctatgagacgatgcgccggatccggtcg
aagccagccatcgccaacattcctctgatcgccgtcactgcgaaggccatgaaaggggac
cgccagaagtgcctcgacgccggcgcttccgactatatttccaagccggtcgacatcgac
ctcctgctggccttgctgcgcgtttggatcggccgttcgaaaagcgaccgcaaaccggtg
aagtcacggtccgcccccagtaaggtcgcctga
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integrated database retrieval system
