Sphingomonas rhizophila: H9L12_09850
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Entry
H9L12_09850 CDS
T07014
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L12_09850 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_09850 (uvrB)
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L12_09850 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L12_09850 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
Microtub_bd
Kinesin
AAA_16
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QNN64595
UniProt:
A0A7G9S9S0
LinkDB
All DBs
Position
complement(1925343..1927538)
Genome browser
AA seq
731 aa
AA seq
DB search
MAIQIRTTLAEPETGEAFVPHRPARPDKAEGGKKFVIKSDYEPAGDQPTAIAELVEGIRD
NGEVNQVLLGVTGSGKTFTMAKIIEATQRPALILAPNKILAAQLYGEFKSFFPDNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRSLLERDDVIIVASVSCLYGIG
SVETYSAMIFTMKKGESADQREIIRKLVALQYKRNDQAFARGNFRVKGDNLEIFPSHYED
TAWRVSFFGDEIEEIVEFDPLTGKKVASLDSVKVYANSHYVTPGPTLKQAMEAIKHELAE
RLKELVAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQS
VFVSATPGGWELEATGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLVFEAKETAKKGYRT
LVTTLTKRMAEDLTEYLHEAGLRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVAILDADKEGFLRSETSLIQNIGRAARNVDGKVILYADRITGSMERALNETN
RRREKQQAYNAEHGITPATIKRDIADIIAHVSTRDGVVVETGDDDRPHLVGHNLRAYIGD
LEQRMRKAAADLEFEEAGRLRDEIRRLEEDELGIPDHERAAPRSGNSTQGKPGTRRTGFG
KTQRKWGGGRR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagatccgcaccaccctcgccgagcccgaaaccggcgaagcctttgtcccg
catcgcccggcgcggcccgacaaggcggaagggggcaagaagttcgtcatcaagtccgat
tacgaaccggccggcgaccagccgaccgcgatcgccgagctggtcgagggcatccgcgac
aatggcgaagtcaaccaggttctgctgggcgtgaccggcagcggcaagaccttcaccatg
gccaagatcatcgaggcgacccagcggccggcgctgatcctggcaccgaacaagatcctc
gccgcgcagctctacggcgaattcaagagcttcttccccgacaacgccgtcgaatatttc
gtcagctattacgactattaccagcccgaggcctacgtgccgcggtccgacacctacatc
gagaaggaaagctcggtgaacgaggcgatcgaccgcatgcgccactccgcgacgcggtcg
ctgctggagcgcgacgacgtgatcatcgttgcctcggtgtcgtgcctatatggcatcggc
tcggtcgagacctattcggcaatgatcttcacgatgaagaagggcgaaagcgccgaccag
cgcgagatcatccgcaagctcgtcgcgctgcagtacaagcgcaacgaccaggctttcgcg
cgcggcaatttccgggtgaagggcgacaatctcgaaatcttcccgtcgcactatgaggac
accgcgtggcgcgtgtccttcttcggcgacgagatcgaggagatcgtcgagttcgacccg
ctgaccggcaagaaggtcgccagcctcgacagcgtcaaggtttacgccaactcgcactac
gtcacgcctggcccgacgctgaaacaggcgatggaagcgatcaagcatgaactggccgag
cggctgaaggagctggtcgcggaaggacggctgctggaggcgcagcggctggagcagcgc
accaatttcgacctggagatgatcgccgccaccggcagctgcgcggggatcgagaattac
agcaggttcctgaccggccgcctgccgggcgaacccccgccgacgctgttcgaatatctg
cccgacaatgcgctgttgttcgtcgacgaaagtcaccagaccgtgccgcagatcggcgcg
atggcgcgcggcgaccaccggcggaagatcacgctggccgaatacggcttccggctgccg
agctgcatcgacaaccgaccgctgcgtttcaacgaatgggacgcgatgcggccgcagtcg
gtgttcgtctcggcgaccccgggcgggtgggagctggaggcgaccggcggcgtgttttcc
gaacaggtcatccggccgaccgggctgatcgacccgccggtcgagatcaagccggtcgag
gatcaggtcgacgatctggttttcgaggcgaaggagacggccaagaagggctatcgcacg
ctggtcaccacgctgaccaagcgcatggccgaggatttgaccgaatatctccacgaagcg
gggctccgggtccgctacatgcatagcgacgtcgagacgctggagcgtatcgagttgatc
cgcgacctgcgccttggcgtctacgacgtgctggtcggcatcaacctgctgcgcgaaggg
ctcgatatccccgaatgcgggctggtcgcgatcctcgacgccgacaaggaaggcttcctg
cgcagcgagacctcgctgatccagaacatcggccgcgccgcgcgcaatgtcgatggcaag
gtcattctctatgccgaccggattactggatcgatggagcgcgcgcttaacgaaacaaac
cgtcgccgcgagaagcagcaggcgtacaatgccgagcacgggatcacgccggcgacgatc
aagcgcgacatcgccgacattattgcccatgtttccactcgcgacggggtcgttgtggaa
actggtgacgatgaccgcccacacctcgtcggtcacaaccttcgtgcctacatcggcgat
ctggaacagcggatgcgcaaggccgccgccgacctggagttcgaggaagccggccgcctg
cgcgacgagatccgccggctggaagaagacgagctcggcatccccgatcacgaacgcgcg
gcgccgcgctccggcaactcgacccaagggaaaccgggcacgcgccgtaccgggttcggc
aagacccagcgcaagtggggtgggggccggcgctaa
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