Sphingomonas rhizophila: H9L12_11455
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Entry
H9L12_11455 CDS
T07014
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi03030
DNA replication
srhi03410
Base excision repair
srhi03420
Nucleotide excision repair
srhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L12_11455 (polA)
03410 Base excision repair
H9L12_11455 (polA)
03420 Nucleotide excision repair
H9L12_11455 (polA)
03440 Homologous recombination
H9L12_11455 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhi03032
]
H9L12_11455 (polA)
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_11455 (polA)
Enzymes [BR:
srhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L12_11455 (polA)
DNA replication proteins [BR:
srhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9L12_11455 (polA)
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H9L12_11455 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L12_11455 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DNA_polI_exo1
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QNN64841
UniProt:
A0A7G9SAG6
LinkDB
All DBs
Position
2243906..2246725
Genome browser
AA seq
939 aa
AA seq
DB search
MAEATDKQPHLYLVDGSSYIFRAYHQLPPLTNRHGTPAGAVYGYTAMLWKLAASLEQEDG
PSHLAVILDASSNTHRNQMYDQYKANRPPPPEDLVSQFPLIRVATRAFSIPCIEEEGLEA
DDIIACYAKAASAKGWRTTIVSSDKDLMQLIDDQVDMLDTMKDRRIGRPEVIEKFGVGPE
RVGDVLALMGDKVDNVPGIPGIGPKTASQLINDFGDLETVLASTDRITKPKLKQSLIDHA
ADARLSRQLVELVCEHPLPEPLDDLRLKGIPPEPLREFLEDQGFKTLLARMVGGTSATRN
VPVQSLRNDVKPSSAAPVPSGTGRGEVERITVDRTLYQTVTTLDALDAWIAEARNQGFVA
LDTETDCIDCIVAKLAGISLATQPNKACYIPVGHSGADMFSAAPDQLAKADVLARLKPLL
EDPAVLKIGHNLKYDLVMFAKVGIAVAPYDDTMLLSFNLDAGLGSHGMDELAKLHFEHEC
IAFKSVCGTGQKQITFDKVPLDAATEYAAEDADITLRLWQRLKPRVAAEHVAQVYEMVDR
PLSATVARMEQRGVKVDRGYLSKLSGTFADEIAKLEAQVHEAAGGPFTIGSPQQLGQVLF
ERLGLKGGRKGKSGSYSTDVNELERLAGEGVDVARLVLDWRQLTKLKTTYTDALQAQINP
DTGRVHTSYGLAMAQTGRLSSTDPNLQNIPIRTELGRQIRDAFVAEPGHVLMSADYSQIE
LRLAAHMADVPQLKEAFRAKEDIHSMTAEELFGSVDRDTRNRAKTVNFAILYGISSWGLA
GRLGISREEGKAIIDRYFERFPGISSYINDTLAFAREQGFTRTLFGRKTHFPNIRSPQMN
LRQGSERAAINAPIQGTSADLIKRAMNRIDAALSKAGLPDVRMLLQVHDELVFEVPKGQE
ERAAEVVRAVMSGAAEPAITLDVPLDVEVGWGEHWGAAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcaaccgacaagcaaccgcatctctatctggtcgacgggtcgagctacatc
ttccgcgcctaccaccagctgccgccgctgaccaatcgtcacggcacgccggccggcgcc
gtctatggctacaccgcgatgctgtggaaactggccgcaagcctcgagcaggaggacggg
ccgagccacctcgcagtgatcctcgacgcgtcgagcaacacccatcgcaaccagatgtac
gaccagtacaaggccaaccggccgccgccgcccgaggacctggtttcgcaattcccactg
atccgcgtcgccacccgtgccttttcaattccctgcatcgaggaagaggggctggaagcc
gacgacatcatcgcctgttacgccaaggccgctagcgccaagggatggcggacgacgatc
gtcagcagcgacaaggacctgatgcagctgatcgacgaccaggtcgacatgctcgacacg
atgaaggatcgccgcatcggcaggccggaagtgatcgagaagttcggcgtcgggccggag
cgcgtcggcgatgtgctggccctgatgggcgacaaggtcgataacgtcccgggtattccg
ggcattggtcccaagaccgcgtcgcaactgatcaacgatttcggcgacctggaaactgtg
ctggcctcgaccgaccggatcaccaagccgaagctgaagcagagcctgatcgaccatgcc
gcagacgcacgcctgtcgcggcagttggtcgagctggtctgcgaacatccgctgcccgaa
ccgctcgacgacctgcggctgaagggcattccgcccgaaccacttcgcgaattcctggag
gaccaagggttcaagacgctgttggcgcggatggtcggaggcaccagtgcgaccagaaac
gttccggttcaatcccttaggaatgacgtcaagccgtcatccgccgctccggtgccgagc
gggaccggccgcggcgaggtcgaaaggattaccgtcgaccggaccctgtaccagacggtg
acgacgctcgacgcgctcgacgcctggattgcggaggcgcggaaccagggctttgtcgcg
ctcgacaccgaaaccgactgcatcgattgcatcgtcgccaagcttgccgggatcagcctt
gccacgcagccgaacaaggcctgctacattccggtcggtcattcgggcgccgacatgttc
agcgccgcgcccgaccaattggcgaaggccgacgtgctggcgcggttgaagccgctgctg
gaagatcctgcggtcctcaagatcggccacaacctcaagtacgaccttgtcatgttcgcc
aaggtgggcatcgccgtcgccccttacgatgacacgatgctattgagtttcaatctcgat
gccgggcttggcagtcatggaatggacgaactcgccaagcttcacttcgagcatgagtgc
attgccttcaagtcggtgtgcggcaccgggcaaaagcagattacctttgacaaggtgccg
ctggacgccgcgaccgaatatgccgccgaggacgccgacatcacgctgcgactgtggcag
cggctgaagccgcgcgtcgccgccgaacacgtcgcgcaggtctacgagatggtcgaccgg
ccgctgtcggccaccgtggcgcggatggagcagcgcggggtcaaggtcgaccgcggttac
ctgagcaagctgagcggcacctttgccgacgaaatcgccaagctggaggcacaggtccat
gaggccgccggcgggccgttcacaatcggatcgccgcagcagcttggccaggtgctgttc
gagcggctcggccttaaaggcgggcgcaagggaaagagcgggagctactccaccgacgtc
aacgaactggagcgcttggcgggcgagggcgtcgacgtcgcgcggttggtcctcgactgg
cgccagctgaccaagctcaagacaacgtacaccgacgcgcttcaggcgcagatcaatccg
gacacgggccgcgtccacaccagctacggccttgccatggcgcaaaccggtcgactgtcg
tcgaccgacccgaacctgcagaacatcccgatccgcaccgagctcggccgccagattcgc
gacgccttcgttgccgagccgggccatgtgctgatgagcgccgattatagccagatcgag
cttcggctggcggcgcacatggccgacgtgccgcagctgaaggaggcgttccgcgccaag
gaagacatccactcgatgactgccgaggagctgttcggaagcgtcgaccgtgatacgcgc
aaccgcgccaagacggtcaacttcgccatcctctatggcatttccagttggggcctcgcc
ggccgccttggaatcagccgagaggagggcaaggcgatcatcgaccgctatttcgagcgc
ttccccggcatctctagctatatcaacgacacgctggcgttcgcgcgcgaacaggggttc
acgcgcaccctgttcggccgcaagacgcatttcccgaatatccggtcgccacagatgaat
ttgcggcaaggcagtgagcgggctgcgatcaacgcgccgatccaggggaccagcgccgac
ctcatcaagcgggcgatgaatcgaatagatgctgcgctgtcgaaggcaggcctgcccgat
gtccgcatgctgctgcaggtccacgacgaactggtgttcgaggtgcccaagggccaggaa
gagcgagccgctgaagtcgtgcgcgcggtgatgagcggagcggccgagccggcgatcacg
ctcgacgtgccgctcgacgtcgaggtcggttggggcgagcattggggcgccgcgcattga
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