Sphingomonas rhizophila: H9L12_12595
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Entry
H9L12_12595 CDS
T07014
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
srhi
Sphingomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srhi01002
]
H9L12_12595
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhi01011
]
H9L12_12595
Peptidases and inhibitors [BR:
srhi01002
]
Cysteine peptidases
Family C82
H9L12_12595
Peptidoglycan biosynthesis and degradation proteins [BR:
srhi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H9L12_12595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QNN65015
UniProt:
A0A7G9SAZ0
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All DBs
Position
2464386..2465765
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AA seq
459 aa
AA seq
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MVGWRKSAGRWSVASVGFGLALAATQGAFAQQSAPRDPMAPLPDSRVAKPVTGQPAPGVQ
PKVQQPAGTGVAGQPVTVPYVAPVLPPPVWALGDAQALLTYINSVGTEGLSPTDYDPVGL
AAAIASGDPLAMSKAATDRFNKLSSDLALGHVRGDNRIDWHIVDDDLDGNRQRLLLEEAL
LRHRIPEALNGLLPTHPQYGALRTALGSQANADPAMRNRIRLNMDRWRWLPRELGQKYII
VNVPSFHATLVENGATRWKQRAIAGAIKTPTPQLSTMATGVVLNPWWEVPTSISREVAGK
AGFVAVKGKDGKVQRWRQPPGPANALGQLKFVMYNKYNIYLHDTNARSRFNSQVRALSHG
CIRTQHVLDLATELLGDDDGDWTKDRIDQTLASKKTVQANFVKPLPVYIVYFSAAALNDG
TVVKYDDLYKRDSKVIAALLDKGGTAPAAKAADTAAKGQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggttggcgaaagagtgcgggtcgttggagtgtcgcgtcggtcggctttggcctt
gcgcttgccgcgacgcagggcgcttttgcccagcaatccgccccgcgcgatccgatggcg
cccctgccggacagccgcgtcgccaagccggtgaccggccagcccgcgcctggcgtccaa
ccgaaggtccagcagccggccgggaccggcgtcgccggccagccggtcaccgtgccctat
gtcgcgcccgtccttccgccgccggtctgggcgctgggcgatgctcaggcgctgcttacc
tatatcaacagcgtggggacggagggcttgtcgccgaccgactatgaccccgtcgggctg
gccgccgcgatcgcatcgggcgacccgctcgccatgtcgaaggccgcgaccgatcgcttc
aacaagctgtcgtcggacctcgcgctcggccacgtccggggcgacaaccgcatcgactgg
catatcgtcgacgacgacctcgacggcaatcggcagcgtctcctgctcgaggaggctctg
cttcgccaccgcattcccgaggcgctgaacggcttgctgccgacgcacccacaatatggg
gcgcttcgcaccgcgcttggatcgcaggccaatgccgatccggcgatgcgtaaccgtatc
cggctgaacatggatcgctggcgctggctgcctcgtgagctgggccagaagtatatcatc
gtcaacgtcccgtcgttccacgccacgctggtcgaaaacggtgccacgcgctggaagcaa
cgggcgatcgccggtgcgatcaagactccaacgccgcagctgagcacgatggccaccggc
gtggtgctcaacccgtggtgggaagtgccgaccagcatcagccgggaggtcgccggcaag
gcgggcttcgtcgcggttaagggaaaggacggcaaggtccagcgctggcgccagccgcct
ggacccgccaatgcgctcggccagctcaagttcgtgatgtacaacaagtacaatatctac
cttcacgacacgaacgcgcgcagccgtttcaatagccaggtccgggcgctcagccacggc
tgcatccgcacccagcacgtcctcgacctcgcgacggaactgttgggcgatgacgacggc
gattggacgaaggaccggatcgaccagacgcttgcgtcgaagaagactgtccaagccaac
ttcgtaaagccgctcccggtgtacatcgtctatttcagcgccgcggccctgaatgacggt
acggtcgtcaagtatgacgacctctacaagcgtgattccaaggtgatcgccgccttgctc
gacaagggcggcacggcaccggcggcaaaggccgcggacaccgccgccaagggtcagtag
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