Spirosoma rhododendri: HH216_02805
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Entry
HH216_02805 CDS
T08048
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_02805
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CILP
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QJD77462
UniProt:
A0A7L5DJ59
LinkDB
All DBs
Position
725406..728438
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AA seq
1010 aa
AA seq
DB search
MTNLYAFSPPPQYRRWAVVCILLSLLAFAAQAKNPGIRAASRAVLADVTVTGQVTDAATG
EALAGCSVVVKGTQRGTTTDANGNYRLSVPNGNVTLVFGFIGFVSQEIVVGNQTAINVGL
KSSASELNQVVVIGYGSTTKRDMTGSIKSIKSADFNRGIINSPEQLIQGKIAGVNVTSAS
GEPGSTQTITIRGPGGIRTGSTPLFVLDGLPLDNSSTGGATNPLTFLNPQDIESIDVLKD
ASATAIYGARGANGVVLITTKKGKSGTSNLTLSASVGVSNLARPLNVFSADEYRRQVVAV
GGVLDDKGGATDWQKVVSRTAVTQNYNLGFNGGSQKLTYFGSVGVQRQQGVLKNSQLNRY
TGRINVTQQLLEDRLSLDVNLNASYTDNQRPPITSLVGGAISANPTYPAYDSTGAPYQYQ
SGVNPLISMNLNKDVTATTRVIANVSPSFKILKNLVYKLNLGLDYSNANQDVQALANAVP
QQDGRLDSYYTNNRNTLVENYFTYTLNQGSHNLTALLGHSYQKFFIQGRNWSINKFPITP
VEPIYNPGLGQDLSLANNQPGGYAIQNELQSFFGRATYNFKDRYLLTATLRADGSSKFGS
NNKYGVFPSFSAGWRLSDEDFLKSGPFTDLKLRAGWGQTGNQEIPAKITQALYTATVSGT
TSYPLNSSSTYPAGISYTRLANPDIQWEVSTQTDLGLDFAIFNGALSGSVDYFRKVSEKI
LLQVIPADPVQPASTYWTNVPDMRITNQGLELDLNYRYSSQSGFRFDIGGNLTFIKNVVT
NSPYSVITSGSANGSGLTSATINGYVNNQPIGTFFLKEFTGFDEKGMSTYRDTDGDGLVT
DKDRVALGSALPTKQFNINTTLAYKGFDLAINFNGVSGNKVYDNTANANFYKLRLSKGLN
VTPEAVQYAQESINNSAPVSSRFLKDGRFFRLNNLALGYNLSPKLIGMNRWVNNIRLSVT
GQNLFVITPYNGYDPEVNGNQAINGVVSYGIDYLAYPKARTVIVGLNLTF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatctttacgccttctcaccgccccctcagtaccggcggtgggctgtggtttgt
attttactgagtttgctggcttttgccgcgcaggcgaaaaaccccggcattcgtgcagcg
tcgcgcgccgtgctggccgacgtaaccgttaccgggcaagtaacggatgccgcgaccggc
gaagccctcgcgggctgtagcgtcgtagtcaaaggtacgcagcgcggcacgacgaccgac
gccaacggtaactaccgcctatctgtacccaacggcaacgtaacgctggtgtttggcttc
atcggcttcgtctcgcaggagattgtcgtcggcaatcaaactgccatcaacgtcgggctg
aaatcgtcggcgtcggagctgaatcaggtcgttgtgatcggctacggcagcacgaccaag
cgcgacatgaccggctcgattaagtcgatcaaaagtgctgattttaaccggggtatcatc
aactcaccggagcaactgattcagggcaaaatcgcaggtgtcaacgtaacctcggcgagt
ggcgaaccgggtagtacgcagacgattaccattcgcggaccgggtggtatccgtacgggt
agtacgcccctattcgttctcgacgggctgccgctcgacaactcctcgaccggtggcgca
accaacccgctgacgttcctgaacccccaggacatcgaaagcatcgacgttctgaaagat
gcgtcggcaacggcgatttacggggcgcggggtgctaatggcgtcgtgcttattacgaca
aaaaaaggtaagtcgggcacgtcgaacctgacgctgtcggcgagtgtgggtgtgtcgaat
ctggcgcgtccgctgaacgtgttttctgccgacgaataccggcggcaggtcgttgcggtt
ggtggtgtgctcgacgataaaggtggcgcaaccgactggcagaaagtagttagccgtacg
gccgtgacgcagaattataacctcggcttcaacggcggttcgcagaagctgacctatttt
gggtcggttggtgtgcagcggcagcagggtgtgttgaaaaacagtcagctgaaccgctac
acgggtcgtatcaacgtaacgcagcagttgctcgaagaccggctgtcgctggacgtcaac
ctgaatgcgtcgtacaccgacaatcagcggccacccatcaccagtctggtcggcggagct
atttcggccaacccgacctacccagcctacgactcgaccggcgcaccctaccagtatcag
agtggtgtgaatccgctgatctcgatgaacctgaataaggacgtgacggccacgacccgg
gttatcgcaaacgtatcgccctcgttcaaaatcctgaagaacctggtttacaagctgaac
ctcggccttgattattccaacgccaatcaggacgtacaagcactggcaaacgcggtgccg
cagcaggatggtcgtctggacagttactacaccaacaaccgcaacacgctggtagagaac
tatttcacatatacgctgaaccagggcagccacaacctgaccgcgctgctgggtcattcg
taccagaagtttttcattcagggccgcaactggagcatcaacaaatttccgatcacgccc
gtcgaaccaatctacaaccccggcctggggcaggacctctcgctggccaacaaccagccg
ggcggctacgcgattcaaaacgaactccagtcgttcttcggccgggccacgtacaacttt
aaagaccgctatctgctgacggcgacgctgcgcgccgacggatcgagcaaatttggctcg
aacaataagtacggcgtcttcccgtcgttctcggcaggctggcgtctgtcggacgaagat
ttcctgaaatcaggcccgtttaccgatctgaaactacgcgctggctgggggcagacgggc
aaccaggaaattccggccaagatcacgcaggcactgtacacggcgaccgtttcgggcacg
acgagttacccgctcaacagttcgagcacctaccccgccggcatttcatacacgcggctg
gccaaccccgatattcagtgggaagtgtcgacgcagaccgacctcggccttgatttcgcc
atcttcaacggggcgctgtcgggttcggtcgattatttccgcaaggtgtcggagaaaatt
ctgctacaggttatccccgccgaccccgttcaacccgccagcacctactggaccaacgta
cccgacatgcggatcacgaaccaggggcttgaactggacctgaattaccgctacagcagc
cagagcgggttccgtttcgacattgggggcaacctgacgttcatcaaaaacgtggtcacc
aactcgccctattcggttatcacgtcggggtcggccaacggctcgggcctgacctcggca
acgatcaacggctacgtcaacaaccagcccatcggcacgttctttctgaaagagtttacc
ggtttcgatgagaagggcatgagtacttatcgtgataccgacggcgatggactcgtgacg
gataaagaccgggtggccctcggcagtgcgctgcctacgaagcagttcaatattaacacg
acgctggcctacaaaggcttcgatctggcgatcaacttcaacggcgtgtcgggcaacaaa
gtgtatgacaacacggctaacgccaacttctacaaactgcggctgagcaagggcctgaac
gtgacgcccgaagcggtgcaatacgcgcaggagtcgatcaacaactcggcgccggtatcg
tcgcgcttcctgaaagacggtcggttcttccggcttaacaacctcgcgctggggtacaat
ctcagcccgaagctgatcggcatgaaccgctgggttaataacatccgtctgtcggtaacg
gggcaaaacctgttcgtcattacgccctacaacggctacgacccggaagtcaacggcaac
caggctatcaacggggttgtctcgtacggcatcgactacctcgcctaccccaaagcccgg
acggttattgttggtttaaatctgacgttctaa
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