Spirosoma rhododendri: HH216_03270
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Entry
HH216_03270 CDS
T08048
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_03270
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_03270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
PEGA
EMC7_beta-sandw
SpaA
Motif
Other DBs
NCBI-ProteinID:
QJD77545
UniProt:
A0A7L5DHQ1
LinkDB
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Position
complement(847845..850316)
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AA seq
823 aa
AA seq
DB search
MRVPLLLVFYFVVATSLFAQSVSSSTIRGTITAGEQVLPGATVTLINTRFGTATDSAGVF
QLADVPTGTYQLSVSLVGYDSYRKSVRLMAGQSVQLSISLREAANNLNEVVVTGARATEL
RKSPVAIAVITRKEMNLNANTNAVDAVLKGVPGLSAVTTGPNVSKPFIRGLGYNRVLTLY
NGVRQEGQQWGDEHGIEVDQYGIERAEVIKGPASLIYGSDAVAGVINFIPYIPRGAEGKV
NGDVVGEYHTNNGMIGTSAGLSYTKNGWKAAFRASNKLATAYTNPVDGRVYGTGYRELNL
SAMTGVEKRWGSSFLYATLYNNLQEIPDGSRDSLTRRFTRQVLESDQDDIRQRPLVPENE
LRTYRINPLHQHIQHSRLFTRNRFLIGKSDLSVLAGFQQSVRREYNHPTVPEQPGLYVRL
NTINYEVKYNLPIWRGFEPTLGVNGMYQTNKNLNGTDFPIPDYALLDIGSFLFVKKTIGA
VDISGGMRYDTRSVDWGNQYVQNNPATGFDQLVYSPTSATATPQFAAYSRSFTGMSGSLG
ATYNISERLLVKANLSRGYRAPNITEIGSNGLDPGARIVYLGNRNFQPEFSLQTDIGFIG
YLNDMDVSVELFNNVIDNYIYQARLYDDAGQPVVIVPGNFTYQYQQSKAQLYGAEFSLNL
HPRTSRWLTINNSLALIRGLNRNPQLIELEGDAARYLPFIPPLHGRSEIRATFGREKARL
SGLYVRAELDYYGAQNRFYGVDNTETATPGYALVNAGFGGTINNRQNRPLLQLFFQVDNL
FNVAYQSHLNRLKYFEYYTASPTGRFGIYNVGRNASVKVIVPF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtaccgcttttacttgtcttctacttcgtagttgctacatcactttttgcccag
tcggtcagctcatcaaccattcgcggaacgataaccgccggcgagcaagtcctgccgggc
gcgacggttacgctcattaacacccggttcggcacggccaccgattcggcgggcgtgttt
cagctagccgacgttccgacggggacgtatcaacttagcgtatcgctcgtcgggtacgat
tcataccgtaaaagtgtgcggctgatggctgggcagtccgtacaactgtcaatttcgtta
cgggaggcagccaataatctgaacgaagtggtcgtgacaggtgcgcgggccacggaactg
cggaagagcccggtggcgattgcggtcattacccggaaggaaatgaatcttaacgcgaac
accaacgcggtcgatgcggtgctgaaaggtgtgccggggttgagcgccgtaacaaccggc
cccaacgtctcgaagccatttatcagggggttgggctacaatcgggtgctgacgctttat
aacggtgttcgacaggaggggcagcagtggggcgacgaacacggtatcgaagtagatcag
tatggtatcgagcgggcggaagtgatcaagggaccggctagtctgatctacgggtcggat
gccgttgccggagtaatcaatttcatcccatacatcccgcgcggggccgagggcaaagta
aacggcgacgttgttggcgaataccacacgaacaacggcatgatcggcacatcagcgggg
ctatcgtacacgaaaaacggctggaaagctgcttttcgcgcatccaacaagctggcgacg
gcctacacaaatcctgtcgatgggcgggtgtacggcaccggataccgcgagttgaatctg
tcggccatgacgggggtggaaaaacgctggggctcgtcgtttctttacgcgacgctgtac
aacaacttgcaggagattcccgacggaagccgcgactcgctgacgcgtcggtttacccgg
caggtgttggagagcgatcaggatgatatcagacagcgcccgctggtgcccgaaaatgaa
ttgcgcacgtaccgtatcaacccgctgcaccagcacattcagcattcgcggctgttcacg
cgaaaccggtttctgatcggtaaaagtgatctgtctgtactggccggttttcagcagagc
gttcgccgggagtacaatcacccaacggttcctgagcagccggggctgtacgtgcgactc
aacacaatcaattatgaggtgaaatacaacctgccgatctggagaggcttcgagccgacg
ttgggtgtgaatggtatgtatcagacaaacaaaaacctgaacggtactgattttcccatt
cctgactacgccctgctggatattggctcgtttctgtttgtcaagaaaacaatcggagcc
gtcgacatcagcgggggtatgcggtacgacacgcgctccgtcgactgggggaatcaatac
gtgcagaacaatcctgcaacggggtttgaccagctggtttactcgcccacgagcgcgacg
gcaacgccccagtttgcggcctatagccggtcgtttaccggtatgtcgggtagcctgggc
gcgacctacaatatttccgaacggttgctggtaaaagcgaacctgtcgcggggataccgg
gcgccaaatatcaccgaaattggctccaacgggcttgaccccggtgcgcgcatcgtgtat
ctgggcaaccgtaattttcagccggaattcagcctgcaaaccgacattggctttatcggt
tacctcaacgacatggacgttagcgttgaactgttcaacaacgtcatcgacaactacatc
tatcaggctcggctgtacgatgatgccgggcagccggttgtgattgtgccgggcaatttc
acgtaccagtatcagcaatcgaaagcgcagttgtacggagccgaattcagcctgaacctg
cacccccgcacaagccggtggctgacgattaacaacagcctggctctgatccgggggcta
aatcgtaacccccagttaatcgaactggaaggcgacgcggcacggtacctgccgtttata
cccccgttgcatggtcgttcagaaatccgggcgacgtttgggcgggaaaaggcgcggctg
tcgggcctgtatgtccgggccgaactcgactactatggcgcgcagaaccggttttacggt
gtcgacaatacggaaacggcgacgcccggctacgcactggtcaacgcgggttttggcggt
acaatcaacaaccgccaaaaccgaccgctactccagctcttcttccaggtcgacaacctg
ttcaacgtagcgtatcagtcgcacctgaatcgactcaagtattttgagtactacacggcg
tcgccaacgggccggtttggtatctacaatgtgggtcgaaacgcgagcgtcaaggtgatc
gtgccgttttga
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