Spirosoma rhododendri: HH216_04660
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Entry
HH216_04660 CDS
T08048
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_04660
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
PEGA
Phage_tube_C
Motif
Other DBs
NCBI-ProteinID:
QJD77794
UniProt:
A0A7L5DHH3
LinkDB
All DBs
Position
complement(1184232..1187219)
Genome browser
AA seq
995 aa
AA seq
DB search
MINLYFYKTSRFVFSAVAWLFALSLAAAQGLTGRVTDKTSGSPIPGATVVVVGSSTGATA
DAEGVYRLNVSPGTYNVRFSFVGYEALTLPVTVTTGEETKLNAAIQESSSRLNEVVVVGS
RAATARTNIQTVAPVDVISTKDLKGYAQTDVSQILNFVAPSFNSNRQTVTDGTDHIDPAS
LRGLGPDQVLVLVNGKRRHTTALVNINGSVGRGSVGTDMNAIPVAAIERIEVLRDGAAAQ
YGSDAIAGVINVVLKKNYTGLTASLTAGQSFTNMKYNVPLIGGGSDPRSQSLRDGGVLQF
DFSKGFRLGRNGSLTVAGQVQERGRTNRSGPDNAPTEYLGASGGFPTTPTGQNASDFRTK
LIADDQAIIAQRGYNRQNMIIGNSSSRNYGLFVNGTLPVGVNGSVYFTAGASYRTGTGYG
NNRVPASRSQQPLNADGSLYYADGFLPAIQSIINDQSLLVGYKTKLGQWNMDLSNTFGRN
SFRFDVLNSGNASLPNSNTQQTDFYAGKLKFNQNTTNLDFSRLYAQVGEITGLNLAAGAE
YRRDQFQIEAGEPNSYIGASIGKTVPTAPFTIGGTSPGTTLALPGSQVFPGYQPTDAINA
TRHNFSLYADVEGELFRRLLLDLAGRYENYSDFGSKVTGKLAGRLRLIDALNIRGAISTG
FRAPSLHQRYFQNTSTQFVSGNPSNTLTVNNENPIARQFIGVDALKPETSVNYTLGLTSQ
IGRQFTITVDAYLIDIKDRILYSGAFSRSVLGFAANEYVGINNVRFFANAADTRTKGIDI
VATERLKAGPGQLTLTAAINFNQNKVLSVNPSTLINSAANNENKGGNPDTWFRNIFFDRS
QVALLETGQPQNKINLSASYTINKFDVTLRTVRFGSVTNRTNLDPYAKNASGAYYNSQFA
RNEAGDPYIDQTFNPVWITDLTLNYRFTKAVSLSLGANNLFDIYPDQIYIDPRNALGSVD
YASGRDASNRGRFLFGSNQGGFNGRFLFTRLTASF
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgattaatctgtatttctataaaacttcacgatttgtattttccgcagttgcctggctc
ttcgcgctctcgctggcagccgcgcagggtctgaccggacgcgtcaccgacaagacgagt
ggttcgccgattccgggcgcaacggtcgtggtggtaggcagcagtaccggtgccaccgct
gacgccgaaggtgtgtatcggctcaacgttagccccggtacgtacaatgtccggttcagc
ttcgtaggctacgaagcacttacgctacccgttacggtaacgacgggagaggagactaaa
ctcaacgcggctattcaggaatcatcgtcgcggctcaacgaagtcgttgtcgtgggatcg
cgtgctgctacagcccgcaccaacattcagacggtggccccggtcgacgtgattagcacg
aaagacctcaaaggctacgcgcaaaccgacgtcagtcagattctgaacttcgttgcgccg
tcgttcaactccaaccgccaaaccgtaaccgatggtaccgaccacatcgacccggcatcg
ctgcgcgggcttggccccgatcaggtgctggtgctggttaacggcaagcgtcggcacacg
acggcactggttaacattaacggttcggtgggtcgtggttcggttggtaccgacatgaac
gccatcccggtagcggctatcgagcgcattgaagtgctgcgcgacggagcggctgcgcag
tatggttcggatgccattgcgggcgttatcaacgtcgtgctgaaaaagaactacacgggc
ctgacggcatcgctgacggccgggcagagtttcaccaacatgaaatacaacgtgccgctg
attggtggtggctcggacccccgcagtcaatcgctgcgcgacgggggcgtgttgcagttc
gatttttcaaaaggcttccgactcggtagaaacggtagcctgacggtcgccgggcaggtg
caggagcgcggccggacgaaccgcagtggccccgacaacgcgccgacggagtatctgggt
gcgtcgggtggttttccaacgacaccaacgggccaaaacgcaagtgattttcggaccaaa
cttatcgccgacgatcaggcgattatcgcccagcggggctacaaccggcagaacatgatc
attggtaactcgtcgtcgcgcaactacgggttgttcgtcaacggtacgctgccggtgggc
gtcaacggaagcgtgtatttcacggcgggtgcctcgtaccgcacgggtacgggctacggt
aacaaccgcgtaccggcctcgcgttcgcagcagccgctcaacgccgatgggtcactgtac
tacgccgatggttttttgcccgccattcagtcgatcatcaacgatcagtcgttgctggtg
gggtacaagacgaagctgggacagtggaacatggacctgagcaacacgttcggccgtaac
tcgttccgcttcgacgtgctgaattcggggaacgcgtcgctgcccaacagcaacacgcag
caaacggatttttacgcgggtaagctgaagttcaaccagaacacaacgaacctcgatttc
tcgcggctgtacgcgcaggttggcgaaattacggggctgaacctggcggctggtgccgaa
taccggcgcgaccagttccagatcgaagcgggtgagccaaactcgtacatcggtgccagc
atcggcaagactgtgccaacggctccgtttaccattggcggtacatcgcccggtacgacg
ctggctctgcccggttcgcaggtgtttcccggctaccagcctaccgacgccatcaacgcc
acccggcacaatttcagcctgtacgccgacgtggagggcgaactgttccgccgactgctg
ctcgatctggcgggtcggtacgagaactactcggattttggctcgaaagtgacgggtaag
ctggcgggtcgcctgcggctgatcgacgcgctcaacattcgcggagctatcagcaccggc
ttccgcgcgccgagcctgcatcagcggtatttccagaacacaagtacgcagtttgtgagc
ggcaacccgtcgaatacgctgacggtgaacaacgaaaacccgattgcccggcagtttatt
ggtgtcgacgcgctgaagcccgaaacgtcggtcaactacacgctgggtctgacgagtcag
atcggtcggcagttcacgattacggttgacgcctacttgatcgacatcaaagaccggatt
ctgtattcgggtgcgttcagccggtcggtgctgggctttgccgccaatgagtacgtggga
atcaataacgttcgcttcttcgccaatgccgccgacacccgcacgaaagggatcgacatc
gtggcgacggagcggctgaaagctggtccgggtcaactgacgctgacggcggctatcaac
ttcaaccagaacaaggtgttgtcggtgaacccgtcgacgctgatcaatagtgcggccaac
aacgagaacaagggcggcaaccccgatacgtggttccgcaacatcttcttcgaccgctcg
caggtagcactgctcgaaacgggacagccgcagaacaagatcaacctgagcgcgtcgtac
acgatcaacaagttcgatgtaacgctgcggacggtacgctttggctcggtgacgaaccgg
acgaatctggacccctacgcgaaaaacgccagcggtgcctactacaattcgcagtttgcc
cgcaacgaagccggtgatccgtacatcgatcagacattcaatccggtctggattacggac
ctaacgctgaactaccgcttcacgaaagctgtcagtctgtcgctgggtgctaacaacctg
ttcgatatctaccccgatcagatttatatcgaccctcgcaacgcgctgggctcggtcgat
tacgcgtcgggtcgtgatgcgtcgaaccggggccggttcctgtttggctcgaaccagggt
ggcttcaacggtcgcttcctgttcacccgcctaacggcatctttctaa
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