KEGG   Spirosoma rhododendri: HH216_05285
Entry
HH216_05285       CDS       T08048                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
srho  Spirosoma rhododendri
Pathway
srho03030  DNA replication
srho03430  Mismatch repair
srho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HH216_05285
   03430 Mismatch repair
    HH216_05285
   03440 Homologous recombination
    HH216_05285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srho03032]
    HH216_05285
   03400 DNA repair and recombination proteins [BR:srho03400]
    HH216_05285
Enzymes [BR:srho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HH216_05285
DNA replication proteins [BR:srho03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HH216_05285
DNA repair and recombination proteins [BR:srho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HH216_05285
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: QJD77904
UniProt: A0A7L5DHR7
LinkDB
Position
complement(1333754..1334299)
AA seq 181 aa
MYCIVDVETTGGIKGPTRITEIAIFRHDGQQVVDSFHTLLNPECPIPPFIRHLTGISDEM
VAQAPLFSEVAHEILRITEGAIFVAHNVSFDFGFIQKELNWLGYDFLRRTICTVRSSRKI
LPGHPSYSLGKLCRSLEIPLNGRHRAAGDAAATVKLFEMLLEHDKYGHIPRPSSAIYSED
N
NT seq 546 nt   +upstreamnt  +downstreamnt
gtgtattgtatagtcgacgttgaaacaacgggcggcatcaaaggcccgacccgcattacg
gaaatagccatttttcgccacgatgggcagcaggttgtcgactcgtttcacacgctgctc
aaccccgaatgccccattccgccctttattcggcacctaaccggtatttccgacgagatg
gtggcgcaggcacctttgttttcagaagtggcccatgaaatcctgcgtatcaccgaaggg
gcgatcttcgtggcccacaacgtcagcttcgacttcggctttattcagaaagaactcaac
tggctgggctatgatttcctccgccggacaatctgcaccgtgcggtcgagtcgaaaaatt
ctacccggccacccgtcgtatagtctcggcaagctgtgccgttcgctggaaattccgctc
aacggtcgtcaccgggccgctggcgacgcagccgcgacggtgaagctgttcgagatgctg
cttgaacacgacaaatacggtcatattccccggccatcgtccgccatttactcggaagac
aattga

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