Spirosoma rhododendri: HH216_05955
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Entry
HH216_05955 CDS
T08048
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srho03400
]
HH216_05955
DNA repair and recombination proteins [BR:
srho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH216_05955
Archaeal homologous recombinant proteins
HH216_05955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
RsgA_GTPase
AAA_21
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QJD78015
UniProt:
A0A7L5DIW9
LinkDB
All DBs
Position
complement(1494757..1497837)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKIRQIRFKNINSFYGEHPPIVFTDGILGKTGLFIISGSTGAGKSTLLDVMTLALFNRVP
RIMDHDGRGLSKDRLLAEGLIINQRAAIEPKTDAYAEVEYELNGKAFRSRWSINKNRNGN
WNDYEMEVAELPDEKLLTEKKREVPGFNTTKIGLTYEQFIRSMVLAQGAFDKFLRASAGE
RSKLLEQITGTDIYRRLSQRAHTQNKLYEENLREKQQAVELVQLLTAEQLSELKTTKQTI
DARLTTLTDELTFYRDEAKRAEQQEALDKDIARLGRKQQEAADKQVRFAPDAERLERHSH
VADLTELFSNLSHAEGTLQRAQGDQQRAEQAIQGLHNELETVLTTAQQLTHQPALSEHTL
IAQVTDFRERVLSLTQQIDQERKNANSPQQRLAHTIKQATDKWFRSLRLDNLVVMDEQVS
ERKRQVGQQLVKLEEEYAALETSEQVQHEIERLIDQEKKLERLIQLQKDQQKRLTEGLNL
KKQVDAYQVTIDSQRPALNKLLEELTTLEVKQKELDAQKIKLAREANLDELRKSLVAGEA
CPLCGATHHPYAHQYIQRTGLIEVELQVVQADVKTKRTDSEQLTKTIIQSESTQKSLDNQ
RLILRNEYKDNRQTIAEELIALDLDENMQPEFLTDQQQHIHVQREELTTLLSLWEQDRVL
RQLTDDLAALHTTQHQVERLTEERNQLFTGNDVKTACDQLTNRFTTVRSGLATQEGLRQQ
ATVALSNAGQQTTELHSQLQPVLQSRGLSDIQTARQQLLDMDTLRRLQAEKQQLADEATQ
LTANRTDADQRRQALVEARQTDLPSDQIRQLISERDKELRQQTEQLGKIKQALDADATEH
KRHKTLLSDLKKLDDAAMPWRELNRLIGSARGDEYSRFAQGLTLSQLIGLANQRLRDLSD
RYLILKPRDGQDELFVLDQYQGGAERTVTSLSGGETFTLSLGLALALSDLASQNIQIDSL
FIDEGFGTLDPEALDMAVAMLEKLQQDSQKTIGIISHRHEIKERISVQIQIEKGNDGNSR
VSIVEL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgtcagatccgcttcaagaacattaactcgttctacggcgaacatccaccg
attgtatttaccgacggcattctgggcaaaacgggcctgtttatcatttccggttcgacc
ggtgccgggaagtccacgctgctggacgttatgacgctggctttatttaaccgggtgcct
cgtattatggaccacgacggtcgtgggctatcgaaggatcgcctgctcgccgaagggtta
attatcaatcaacgggcggccatcgagcccaagactgatgcttacgccgaagttgaatac
gaactgaacggaaaggcgtttcggtcgcgctggtcgatcaataaaaaccgcaacggtaac
tggaacgactacgagatggaagtagccgagttacctgatgaaaaactgctcaccgaaaag
aagcgggaggtacctggtttcaacactacgaagatcggtctgacgtacgagcagtttatt
cggtcgatggtgctggcgcagggagcattcgacaaatttctgcgggcgtcggccggggag
cggagtaagttgcttgagcaaattacgggtaccgatatttaccgtcggcttagtcagcgg
gcccacacgcagaataagctttacgaagaaaaccttcgggagaagcaacaggcggtcgaa
ttggtgcagctactgactgccgagcagctaagcgagctcaaaacaacgaaacagaccatc
gacgcacgcctgacgaccctgaccgacgagctaacgttttaccgggacgaagccaagcgg
gcagagcaacaggaagcgctagataaagacattgcgcggctgggcagaaaacagcaggag
gccgccgacaaacaggttcgttttgcccctgacgccgaacggctcgaacggcacagccac
gtggctgacctgacggagttgttcagcaatctgagccacgcagaaggtacgctgcaacgg
gcacagggcgatcagcaacgggcagaacaggctatacagggcttacacaatgagttagaa
accgttctgacaacggcgcaacagctgacgcatcagccggccctgtcggagcatacgctg
attgcccaggttaccgacttccgggagcgggttctgtcgttgacgcagcagatcgatcag
gagcgcaaaaacgccaattctccccagcagcgactggcgcacaccatcaaacaggccacc
gacaagtggttccgctcgctgcggcttgacaatctggttgtgatggacgagcaggttagc
gagcggaaacgtcaggtcgggcaacagttggtcaagctcgaggaagagtacgcggcactg
gaaacgtctgagcaggttcagcacgaaatcgaacgccttatcgatcaggagaaaaagctg
gagcgactaattcaactgcaaaaagatcagcagaagcgattgacggaaggcctcaatcta
aagaaacaagtcgatgcgtaccaggtaacgattgatagtcagcgccctgccctcaacaaa
ctccttgaagagctgactacgctggaagttaagcaaaaggagcttgacgcgcagaagatt
aagctggcgcgagaggctaatctggatgagttacggaaaagcctagtagccggggaagcg
tgcccgctgtgtggtgcgacccatcatccttatgcccaccaatatattcagcggaccggt
ttaattgaggttgaactacaagtggtgcaagccgatgtaaagacaaagcgtactgatagt
gagcagttaaccaaaacgatcattcaatctgagtctacccaaaagagtctcgataaccaa
cggcttattctgcgcaacgaatacaaggataatcggcaaacgatcgccgaagagctgatt
gcgctggacctcgacgaaaacatgcagccggagtttttgaccgatcagcaacagcatata
cacgtgcagcgggaagagttgacgaccttgctttcgctgtgggagcaggacagggtgttg
cggcaactaaccgacgacctggccgcactgcacacaacgcaacatcaggtagaacggctg
accgaagaacgcaatcagctttttaccgggaatgacgtcaaaactgcatgtgatcaattg
acgaatcgctttacaacggttcgttctggtctggcgacgcaggagggattgcgccagcaa
gctactgtagcgctgagtaacgccgggcagcagactaccgaactgcacagtcagcttcag
cctgtattgcagagccggggtttatcggatatacagacggcgcgtcagcaactgctggac
atggacacgctccgccggttacaggccgaaaagcagcagctcgcggatgaagcaacgcaa
ctgacggccaaccgtaccgacgccgatcaacgtcggcaggccctggtggaagcccgccaa
accgacttgccttctgatcagattcggcagcttattagtgaacgtgataaggagttacgg
cagcagacagagcaattgggcaagatcaaacaggcgctcgatgccgatgcaacggaacac
aagcggcacaaaaccctgcttagcgacttgaaaaagctggacgacgcggccatgccttgg
cgtgaactgaaccggctgatcggtagcgccagaggagacgagtacagtcgattcgcgcag
gggctcacgctatcacagttaatcggcctggccaaccaacgcctgcgcgacctgtcggac
cggtatctgattctgaagccacgagacgggcaggacgaactctttgtgctggatcagtac
cagggtggggcagagcgtacggtgacaagcctgtcgggtggcgaaacgtttacgctcagc
ttggggctggcattggccttatccgatctggcatcgcaaaatattcagatcgacagtcta
ttcatcgacgagggattcgggacattggaccccgaagcgctggatatggcggtggcgatg
ctcgagaaacttcagcaggatagtcagaaaacgatcggtatcatttcgcaccgtcacgaa
ataaaggagcgtatcagcgttcagattcaaatcgagaaaggaaatgacggcaacagtcgg
gtttcgatcgtcgaattataa
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integrated database retrieval system
