Spirosoma rhododendri: HH216_06290
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Entry
HH216_06290 CDS
T08048
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH216_06290 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srho01007
]
HH216_06290 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srho03016
]
HH216_06290 (lysS)
Enzymes [BR:
srho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HH216_06290 (lysS)
Amino acid related enzymes [BR:
srho01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HH216_06290 (lysS)
Transfer RNA biogenesis [BR:
srho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HH216_06290 (lysS)
Prokaryotic type
Other AARSs
HH216_06290 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
DUF4651
Motif
Other DBs
NCBI-ProteinID:
QJD78070
UniProt:
A0A7L5DQZ0
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All DBs
Position
complement(1565725..1567518)
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AA seq
597 aa
AA seq
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MLLSEQEINRRQKREELMRMGIDPYPAPLFDLTHTIAQLRDAFADKTGADTQGGYQPHLD
FKDQTPWNTVRLAGRLMSFRIMGSASFAEMQDSTGRMQLYFRRDDLCPGDDKTLYNTVFK
KLLDIGDIIGIEGYVFTTQTGELSVYVQSFTVLNKSLRPLPVVKEVVNEQGEKETYDAFT
DPEQRYRQRYVDLIVNPQVRDVFVKRTKLVNSIRQFLSQKGYLEVETPILQPIHGGATAR
PFQTHHNTLDMTLYMRIANELYLKRLIVGGYDGVFEFAKDFRNEGMDRTHNPEFTQVEFY
VAYKDYLWMMDTIEEMVEKVAIDVAGTTKVTVGENVIDFKRPWKRLTMFEAIQEYTGVDV
SAMDEAQLRQVAEDRGIKTDSSMGKSKLIDELFGDACEPNLIQPTFITDYPVEMSPLTKK
HRSKAGLVERFEAICNGKEIANAYSELNDPIDQRERFEEQLRLAERGDEEAMMLDEDFLR
ALEYGMPPTAGVGLGIDRLAMIMTNQPSIQDVLFFPQMRPEKKLEQSGEADFLAAGVPAG
WIPALQKMNILTVEQLRATSPNKLFNDLGGARKRLKLDIPMPTIADVHGWTGHVKLA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctactgagtgaacaggagataaaccgccgacagaagcgggaagaactgatgcggatg
ggtatcgacccctaccccgccccgctcttcgaccttacccataccattgcccagctccgc
gacgccttcgccgataagaccggtgccgatacgcagggcggctaccagccccacctcgac
ttcaaagaccagaccccctggaacaccgtccggctcgcaggccgactgatgagcttccgc
attatgggcagcgcatcgtttgccgaaatgcaggactcaaccggccggatgcagctgtac
ttccggcgcgacgacctctgccccggcgacgacaagacgctgtacaacacggtcttcaaa
aagctgctcgacatcggcgacatcatcggcatcgaaggctacgtctttacgacgcagacc
ggcgaactgtcggtgtatgtgcagtcgtttacggtgctgaacaagtcgctgcggcccctg
ccggtggtgaaagaagtggtgaacgagcaaggcgaaaaagaaacctacgacgccttcacc
gaccccgaacagcgataccggcagcggtacgtcgacctgatcgtgaacccgcaggtgcgc
gacgtattcgtgaagcgcacgaagctggtcaactcgatccggcagtttctgagccagaaa
gggtatctggaagtcgaaacgccgattctccagcctatccacgggggtgccacggcccgc
ccattccagacgcaccacaacacgctcgacatgacgctgtatatgcggattgccaacgag
ctgtacctgaaacggctgatcgtgggtggctacgacggggtgttcgagttcgccaaagac
ttccgcaacgaaggcatggaccgtacccacaacccggagtttacgcaggtcgaattttac
gtggcctacaaagactatctctggatgatggacaccatcgaggagatggtcgagaaggta
gctatcgacgtggccggtacaacgaaagtgacggtgggcgaaaacgtgatcgactttaag
cggccctggaaacggctgacaatgtttgaagcgattcaggaatacacgggcgtcgacgtg
tcggcgatggacgaagcgcaactgcggcaggtagccgaagaccggggtatcaaaaccgat
tcgtcgatgggtaagtcgaaactgatcgacgaactgtttggcgatgcctgcgaacccaac
ctgattcagccgacgttcattacggattaccccgtcgagatgtcgcccctgaccaagaag
caccggagcaaagccggactggtcgagcggtttgaagcgatctgtaacgggaaagaaatc
gccaatgcgtactcggagctgaacgatcccatcgatcagcgcgaacggtttgaagagcag
cttcggctggccgagcggggcgacgaagaagcgatgatgctcgacgaagacttcctccgc
gcccttgaatacggaatgccccccacggcaggcgtcgggctgggtatcgaccggctggca
atgattatgaccaaccaaccgtcgattcaggacgtgctgtttttcccgcagatgcggccg
gagaagaagctggagcagtcgggcgaagccgatttcctcgcggctggcgtaccggccggc
tggattccggcgctgcaaaagatgaacatcctgaccgttgagcaactacgcgctaccagc
ccgaacaagctgttcaacgacctcggcggtgcccgcaaacgcctgaaactcgatataccg
atgcccaccatcgccgacgttcacggctggacagggcacgtcaaattagcctga
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