Spirosoma rhododendri: HH216_07200
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Entry
HH216_07200 CDS
T08048
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srho
Spirosoma rhododendri
Pathway
srho03420
Nucleotide excision repair
srho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH216_07200
03430 Mismatch repair
HH216_07200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srho03400
]
HH216_07200
Enzymes [BR:
srho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH216_07200
DNA repair and recombination proteins [BR:
srho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH216_07200
MMR (mismatch excision repair)
Other MMR factors
HH216_07200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF3553
ResIII
TCAD7
Motif
Other DBs
NCBI-ProteinID:
QJD78235
UniProt:
A0A7L5DJF8
LinkDB
All DBs
Position
complement(1752019..1754310)
Genome browser
AA seq
763 aa
AA seq
DB search
MVDYISGLNDPQREAVMHGGGPLMIIAGAGSGKTRVLTYRIAHLIENGVDPFRILSLTFT
NKAAGEMRHRIEKVVGTEARNIWMGTFHSVFAKILRIEAKAIGYTSNFSIYDTDDSKSLL
RSIIKEMALDDKVYRANNVFGRISGAKNRLIGPDDYINNAVIQADDESARMPHIGRIYKQ
YATRCFAANAMDFDDLLFNTNVLFRDHLDILNKYQHKFQHVMVDEFQDTNVSQYLITRKL
AAVHQNICIVGDDAQSIYAFRGANIENILNFQRDYGKENVKIVKLEQNYRSTDTIVQAAN
SIIARNKNQLEKRVFTANEAGPLIEVIKASSDNEEGRLVASSIFETKMNESLVNNDFAIL
YRTNAQSRAFEEALRKMSIKYRIIGGLSFYQRKEIKDLIAYLRFTVNQQDEEAFKRIINL
PKRGIGDTTIAKLSVIAAENQDSIWGIVSDIGKFITGRSAIAIEGFADLIKSFMLLIDQK
DAYEVASHIAKASGLLKELYDDKTVEGLARYENVQELLNAIKEFVDSPDNDDKSLSAFLQ
SVSLLTTADEKEEDGDNDKVTLMTIHAAKGLEFKNVHIVGLEEDLFPSQMMLESRNDLEE
ERRLFYVAITRAEKRLTVSYAETRYHFGRLKMCEPSRFLMEVDQKYLKLSKQRSAPSRMD
FDRPERDRSESTSTGSMAFVRSLAQKTAQRQAPQPTVTHTPSADFAPTSTAELAAGQRVE
HAKFGFGTVKTVDVNGTERKATIQFEKAGEKVLLLSFAKLRVV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgattatatttctggattgaatgacccccagcgggaggccgtcatgcacggcggt
ggaccgcttatgattatagccggtgccggttcagggaagacgcgcgtactgacttaccgc
atcgctcacctgatcgaaaacggcgttgaccccttccgtatcctctcgctgacgtttacc
aacaaagctgccggcgagatgcggcaccggatcgaaaaagtagtcggcaccgaagcccgc
aacatatggatgggtacgttccactcggtgtttgccaagattctgcggatcgaagccaaa
gcgattggctacaccagcaacttctctatctacgacaccgacgactcgaaatcactgctc
cgcagcatcatcaaagagatggcgctggacgacaaagtgtaccgcgctaacaacgtgttc
gggcggatttcgggtgcgaagaaccggctcatcggccccgatgattacatcaataacgcc
gtaattcaggccgacgatgaatcggcccggatgccgcacattggccgaatctacaagcaa
tatgcaacccggtgttttgcagccaacgcgatggacttcgacgatctgctgttcaacacc
aacgtgctgttccgcgatcacctggacattctgaacaagtaccagcacaagttccagcac
gtgatggtcgatgagtttcaggataccaacgtgtcgcagtatctgatcacgcgcaagctg
gcggccgttcaccagaacatctgtatcgtcggcgacgacgcgcagagtatctacgcgttc
cggggggccaacatcgagaatatcctgaacttccagcgcgactacggaaaggagaacgtt
aagatcgtgaagctggagcagaactaccgttccaccgataccatcgtgcaggcggccaac
tcgatcatcgcccgcaacaagaatcagctcgaaaagcgggtgttcaccgccaacgaagca
gggccactgatcgaggttatcaaagcgtcgtcggacaacgaagaagggcgactggtggcc
agttcgattttcgagacgaagatgaacgagtcgctggtcaacaacgacttcgcgattctg
taccgcaccaacgcccagtcgcgggcgttcgaggaagccctgcgcaagatgagcatcaag
taccgtatcatcggcggtctgtcgttctatcagcgcaaagaaatcaaagacctgatcgcg
tacctgcgcttcacggtcaatcagcaggacgaggaagcattcaagcgaatcatcaacctg
cccaagcgcggcatcggcgacacgacgattgctaagctgagcgtgatcgcagccgagaat
caggattccatctggggcatcgtatccgacatcggcaagtttattacgggccggtcagca
attgcaattgaaggcttcgccgatctgattaagagttttatgctcctgatcgatcagaaa
gacgcctacgaagtggcttcgcacattgctaaagcgtcggggctgctcaaagaattatac
gacgacaaaaccgtcgaaggcttggcccggtacgaaaacgtacaggagttgctgaacgct
atcaaggagtttgttgacagcccagacaatgacgacaagagcctgagcgcgttcctgcaa
tcggtatcgctactgaccacggccgacgagaaagaggaagacggcgacaacgacaaggtg
acgctgatgaccatccacgcggctaaggggctggagttcaaaaacgtgcatatcgtcggg
cttgaggaagatcttttcccaagtcagatgatgctcgaaagccgtaacgatctggaagaa
gaacggcggctgttttacgttgccatcacccgcgccgagaagcgactaacggtatcatac
gccgaaacgcgctaccacttcggtcggctgaaaatgtgcgagcccagccggttccttatg
gaagtcgaccagaaatacctgaagctgtcgaagcagcggtcggcaccaagccggatggac
ttcgaccgcccggagcgggaccgcagcgaaagcacgtcgacaggatcgatggcgtttgtg
cggtcgctggcgcagaaaacggcgcagcggcaggctccccagcccaccgttacccacacg
ccgtccgccgacttcgccccaaccagcacggctgaacttgccgccggtcagcgggtcgag
cacgccaagtttgggtttggcacggtcaagaccgtcgacgtaaatggcaccgaacgcaag
gctacgattcagtttgaaaaagcaggtgagaaagtgctgctgcttagcttcgccaagctg
cgggtggtctga
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