Spirosoma rhododendri: HH216_07520
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Entry
HH216_07520 CDS
T08048
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00970
Aminoacyl-tRNA biosynthesis
srho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH216_07520 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
srho03029
]
HH216_07520 (gatB)
Enzymes [BR:
srho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
HH216_07520 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
HH216_07520 (gatB)
Mitochondrial biogenesis [BR:
srho03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HH216_07520 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
QJD78290
UniProt:
A0A7L5DRL2
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All DBs
Position
complement(1822576..1824081)
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AA seq
501 aa
AA seq
DB search
MVADTPRSSDTLTHYEAVIGLEVHCQLLTQSKMFAADTNAFGGDPNTHVSVITLGHPGTL
PKTNRQAVEYAVRIGLAVGSEITRHNVFARKNYFYPDLPKGYQLSQDKGPICVGGTVPIT
AKDPVTGESYQTAIQLHHIHLEEDAGKSIHDGSYWTTQLDYNRAGTPLIEMVTEPCIRTA
DEAGQYLTEVRRLVRYLDICDGNMEEGSLRCDVNVSIRPVGATYLGTKVEVKNLNSIRNV
MRAVDSEIRRQVDLTETGGKIIQETRTFDANTGLSAGMREKETMNDYRYFPDPDLAPVVI
SDAWLADIEAAMPMLPTARFTHFTDHYGLPAYDAALLTDAKEMADYYEETCAALPADKIS
PAAYKAVSNWVMGPVKGQLNEKTLRDRQFPVSAPQLAALIGLVLNETVSQTAAQQVFTLL
LTSPSASPADLAQQHGLVQNRNTDALQTLVESVLAEWPDKVEQYRKGKKNLLGMFVGEVM
KKSKGSADPKLVNQLVVKTLQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgacacgccccgctcatctgatacgctaacccactacgaagccgttatcggc
ctggaggttcattgccagctacttacacaaagtaagatgtttgctgccgacaccaacgcc
tttggtggtgatccaaatacccacgtcagcgtaatcacactgggccaccccggtacactg
cccaaaaccaatcggcaggcggtcgaatacgccgttcggatcggacttgctgtcggcagc
gagatcacgcgtcacaacgtctttgcccggaagaattatttctatcccgacctgccaaaa
ggctatcagttatcgcaggataaaggtccgatctgcgtgggcggcacggtgccgattacg
gcgaaagaccccgttacgggcgagtcgtatcagacagcgattcaactgcatcacattcat
ttagaggaagatgcgggcaaatccattcacgacggcagctactggactacgcaactcgat
tacaaccgggcgggcaccccgttgatcgaaatggtaacggaaccgtgtatacgtactgcc
gacgaagcggggcagtatctgaccgaagtccggcggctggtgcgctacctcgacatctgc
gacggcaacatggaggaggggtcattacgctgcgacgtcaacgtatcgatccggccggtg
ggcgctacttatctcggcacgaaggttgaagtaaagaacctgaactcgattcgtaacgtg
atgcgggccgtcgacagcgaaatccggcggcaggtcgaccttaccgaaacgggcggcaaa
atcattcaggaaacccgcaccttcgacgccaacacggggctgagcgcgggtatgcgtgag
aaagaaacgatgaacgactaccggtatttccccgaccccgatctggcaccggtcgttatt
tccgacgcctggctggccgacatcgaagccgcgatgcccatgctaccgacggcccggttt
acccacttcaccgatcactacggcctccccgcttacgacgcggccctgctcaccgacgct
aaagaaatggccgattattacgaagagacctgcgcagccctacccgccgacaaaatcagt
ccggcggcttacaaagcggtgtcaaactgggtaatgggaccggtaaaagggcagctcaac
gagaaaaccctgcgcgaccgccagtttccggtgtcggctccgcaactggccgcgctgatt
ggcctggtactgaacgaaaccgtcagccaaacggccgcacagcaggtatttacgttgctg
ctcaccagccccagcgccagcccggccgatcttgctcaacagcacggattggttcagaat
cgcaataccgacgcgctgcaaacgttggtagagagcgtattagccgaatggcccgacaag
gtggagcaataccggaaaggcaaaaagaacttgctggggatgttcgtcggtgaagtaatg
aaaaaatcgaaaggctccgccgaccctaaattagtcaaccaactcgtcgttaagacgtta
cagtaa
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