Spirosoma rhododendri: HH216_08810
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Entry
HH216_08810 CDS
T08048
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srho
Spirosoma rhododendri
Pathway
srho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HH216_08810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srho03021
]
HH216_08810
03400 DNA repair and recombination proteins [BR:
srho03400
]
HH216_08810
Enzymes [BR:
srho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HH216_08810
Transcription machinery [BR:
srho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HH216_08810
DNA repair and recombination proteins [BR:
srho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HH216_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Methyltrn_RNA_3
Motif
Other DBs
NCBI-ProteinID:
QJD78515
UniProt:
A0A7L5DK79
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All DBs
Position
2096606..2097595
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKISDMVDNKITVSIKKQSVLKAGDISKFSPS
FEVLNPDMEICHIDDTLDLEMEIFVEKGRGYVPADEPRVNELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETAKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaggtcgtcgtggagaaagccgacgacttt
cacggagtgtttgaattcaaaccccttgagaaaggatacggtgtaacgattggcaacgcg
ctacggcgcattttgctgtcgtcgctggaaggttacgctatcacaagcgtaaaatttcca
ggcgtactgcacgagttttcgtcaattgagggtgttgttgaagacgtgacggagattatc
ctgaacctgaaaatggttcggtttaagaaaatctcggacatggttgacaacaaaatcacg
gtcagcatcaagaagcaatcggtgctgaaagcgggcgatatatcgaagttttcgccttcg
ttcgaagtgttgaatccagatatggaaatttgccatatcgacgacacactcgatctggag
atggaaatttttgtggaaaaaggtcggggctatgttcctgccgatgaaccacgcgttaac
gaactgccgtttggtcacatccccatcgatgccatctacacgccaatcaaaaacgtgaag
tacagcgtcgagaacacgcgggttgagcagaaaacggactatgagcggctgttactcgac
atcgaaacggacgggtcaatccatccggaagaagcgttgaaaggagcggcttacattctg
attcagcacttcatgctgttctcagatcagacgatgacgtttgaaacggccaagccggaa
gaagaaaacgttgttgatgaggaagtgctgcacatgcgcaagctgctgaaaacgtcattg
gcggatctggacctgtcggttcgggcttacaactgtctgaagtcggccgacgtacgtacg
ttgggcgatctggtacggttggagatctccgacatgatgaagttccgcaacttcggtaag
aagtcattgacggagcttgagcaactagtggccgaaaagaacctgacgttcggcatggat
gtggctaaatacagactagacgaagattaa
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