Spirosoma rhododendri: HH216_10015
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Entry
HH216_10015 CDS
T08048
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srho03032
]
HH216_10015
03036 Chromosome and associated proteins [BR:
srho03036
]
HH216_10015
03400 DNA repair and recombination proteins [BR:
srho03400
]
HH216_10015
DNA replication proteins [BR:
srho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HH216_10015
Chromosome and associated proteins [BR:
srho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HH216_10015
DNA repair and recombination proteins [BR:
srho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HH216_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Ogg-HhH
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QJD78727
UniProt:
A0A7L5DS16
LinkDB
All DBs
Position
complement(2380659..2380961)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADVIAEIADKTGIDKVEVTNTLETFFTVVKDSLAEGENIYVRGFGSFINKKRAKKVA
RNISQNKAMIIDEHFIPSFKPAKVFVEQVKTSEKTKETAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaagcagacgtaattgcagagatcgccgataagaccggaattgataaggttgaa
gtgacaaacacactggagacctttttcacggtggtgaaggactcgctggccgagggggag
aatatctatgtaagaggattcggcagtttcatcaataagaaaagagcgaagaaagtagcc
cgtaacatctcgcagaataaagccatgataatcgacgaacattttatccctagcttcaag
ccggctaaggtgtttgtcgagcaggttaaaaccagcgaaaaaaccaaggaaaccgccgaa
taa
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