KEGG   Spirosoma rhododendri: HH216_12055
Entry
HH216_12055       CDS       T08048                                 
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
srho  Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:srho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srho03400]
    HH216_12055
DNA repair and recombination proteins [BR:srho03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    HH216_12055
SSDB
Motif
Pfam: HHH_8 HHH_5 PHP HHH HHH_2 HHH_3 DNA_pol_B_thumb IMS_HHH_1
Other DBs
NCBI-ProteinID: QJD79073
UniProt: A0A7L5DPE1
LinkDB
Position
2912815..2914518
AA seq 567 aa
MSNAEIVDLLELTARLMELHERDAFKTRAFQSAAFNLDKTTADLSQLPVDELVKLPGVGK
SVAQKIHEISQTGRLSDLDALLAETPAGVLDMFRIKGLGVKKVRTLWRELGIDTLDALRQ
AGEEGRIATIKGFGASTQEKILDALTFLQEQQGKLRMDRADELAQRLREQLLPHFERVDV
SGQVRRRVQEVDTVQLLVQTTDPLSAMLTLRGMPELLIDERESSPFVWRGRFAGYDVPVE
LRFNAPDQMDRQLFIQSAAESHLKQPGSAGVALLQAAYTGNDASETAIYERAGLPYVVPE
MREDDFAFRWSTQHHHTNLVTWDDLRGTLHNHSTWSDGKESVASMAAYTRELGLSYFGIA
DHSKTATYAHGLSVEQVMAQHTEIDQLNAGFGDDFRIFKGIESDILGDGSLDYDDEILAR
FDYVVASVHQTLNMSIEKATTRLLRAIENPYTTILGHPTGRLLLAREGYPIDHRAIIDAC
AEHNVVIEINASPYRLDIDWRWIDYAMQQGVMLSINPDAHSLAGLLDMHYGVDIARKGGL
TAEMTFNALPLEKMQAYLQQRRSNLVK
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgagtaacgctgaaattgtcgacctgctggaactgacggcccggttgatggagcttcac
gaacgtgatgcgtttaaaacccgcgccttccagtcggccgcgttcaacctcgataaaact
accgccgacctaagccagctgccggtcgatgagctggtcaagctgccgggcgtgggaaaa
agcgtcgcgcagaaaatccacgaaatcagtcagaccgggcggctgtcggatctcgatgcg
ctgctggccgaaacacccgccggggtgctcgatatgttccgcatcaaggggctgggcgtc
aagaaagtacgcaccctctggcgcgaactaggcatcgacacgctcgacgcactgcggcag
gcgggcgaagaagggcgtattgccacgatcaaagggtttggggccagtacgcaggagaaa
atcctcgacgcgctgacgtttttgcaggaacagcagggcaaactccgcatggaccgtgcc
gacgaactggcgcagcggctgcgcgaacagctattgccgcatttcgagcgcgtcgacgtc
agcgggcaggtacgtcggcgggtgcaggaagtcgacaccgtgcagctgctggtacaaacc
accgatccgctctcggccatgctcacactccggggtatgcccgaactgctgatcgacgag
cgcgaatcgtcgccgtttgtctggcgggggcggtttgccgggtacgacgtaccggtggaa
ctgcggttcaacgcgcccgatcagatggaccggcaactgttcattcagtcggcggctgaa
tcccatctgaaacagccggggtcggcgggtgtcgcgttgttgcaggcggcttacacgggc
aacgacgccagtgaaaccgctatttacgagcgggcgggcctgccgtatgtggtgcccgaa
atgcgcgaagacgacttcgctttccgctggtcgacccagcatcaccacaccaatctggtc
acgtgggatgatctgcgcggcacgctccacaaccacagtacctggtcggatggtaaggaa
tctgtcgcgagtatggcggcttacacgcgggagctgggcctgagctatttcggcatcgcc
gaccactcaaaaacggccacctacgcccacggactgagcgtcgagcaagtgatggcgcag
cacaccgagatcgatcagctgaacgctggttttggtgatgacttccgcatttttaaaggt
atcgaatccgatattctgggcgacggctcgctcgactacgacgacgagattctagcccgc
ttcgattacgtggtggcgtcggtacatcagacgctaaacatgtctatcgaaaaagccacg
acgcgactgttgcgggccatcgaaaacccgtacacgacgattctggggcacccgaccggt
cggctgttgctggcccgcgaaggctatcccatcgatcaccgcgccatcatcgacgcctgc
gccgagcataacgtcgtgatcgaaatcaacgccagcccgtaccggctcgacatcgactgg
cgctggatcgactacgccatgcagcagggcgttatgctgagtatcaatcccgacgcgcat
agcctggccgggctgctcgacatgcactacggcgttgatattgcgcgcaaaggggggcta
accgccgaaatgacgttcaacgcgctaccgctggaaaagatgcaggcgtatctgcaacaa
cggcgtagtaacctggttaaatag

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