Spirosoma rhododendri: HH216_12115
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Entry
HH216_12115 CDS
T08048
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00300
Lysine biosynthesis
srho00470
D-Amino acid metabolism
srho01100
Metabolic pathways
srho01110
Biosynthesis of secondary metabolites
srho01120
Microbial metabolism in diverse environments
srho01230
Biosynthesis of amino acids
Module
srho_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HH216_12115
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HH216_12115
Enzymes [BR:
srho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HH216_12115
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QJD81344
UniProt:
A0A7L5DS64
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All DBs
Position
2928338..2929111
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AA seq
257 aa
AA seq
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MPFFKYQGTGNDFVMIDDRSETFPASDQALIERLCHRRFGIGADGLILLRNDPDYDFRMI
YFNADGAEGSMCGNGGRCIVRFAHDLNLFEGQTRFIAVDGEHTATVTDNDVSLKMSDVAA
IGEQGNHVFLNTGSPHAVLFTDDLESTDVVAEGRAIRYSEPFSPGGTNVNFVQQTDQSSL
YVRTYERGVEDETYSCGTGVTAAALAAHSQLGVAEPVAIRTLGGNLRVSFNQKPDGTFTD
VYLIGPARRVFTGSCTI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
attccattttttaaataccagggtaccggtaacgattttgtgatgatcgacgaccggagt
gaaaccttccccgccagcgatcaggccctgattgagcgactgtgccatcggcgatttggt
attggtgccgatgggctgattctgctgcgcaacgaccccgactacgattttcggatgatt
tatttcaatgctgatggagccgaaggcagcatgtgcggcaatgggggccggtgtatcgtt
cgctttgcccacgacctgaatctgtttgaggggcaaacgcgctttattgctgtggatggt
gagcacactgctactgtaacggacaacgatgtgtcgctgaagatgagcgatgtagctgct
attggcgagcaggggaaccatgtgtttctcaacacaggctctccgcacgccgtgttgttt
acggatgatctggaatcgacggatgtagtggctgaggggcgtgctatccggtacagcgag
ccattcagcccgggtggtacaaacgtaaattttgtacagcagacagaccaatcgtcgttg
tatgtgcgtacatacgaacggggcgttgaagacgaaacctactcctgtggtaccggtgtg
acggcggcagcgctggcggctcacagtcaattgggtgtcgcggagccggttgccatacgc
acgctgggtggtaacctgcgcgtatcgttcaaccagaagcccgatggtacctttaccgac
gtgtacctgattggcccggcccggcgggtgttcaccggaagctgtacaatctga
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