Spirosoma rhododendri: HH216_12580
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Entry
HH216_12580 CDS
T08048
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srho03016
]
HH216_12580 (mnmE)
Transfer RNA biogenesis [BR:
srho03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HH216_12580 (mnmE)
Prokaryotic type
Methyltransferases
HH216_12580 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
MMR_HSR1_Xtn
Ras
Arf
GTP_EFTU
cobW
ABC_ATPase
AAA_16
Roc
ABC_tran
AAA_29
AAA_15
AIG1
Guanylate_kin
SRPRB
AAA_28
AAA_22
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QJD79159
UniProt:
A0A7L5DL17
LinkDB
All DBs
Position
3035037..3036413
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AA seq
458 aa
AA seq
DB search
MLHSEPIAALATAPGIGAIAVIRVSGDDAIAITNRFFRGKDLTQQPTHTAHFGTLRNPDD
TIIDEVLATVFRAPRSFTKEDVVEISCHGSEFIVRQILQRLVAEGVRLARPGEFTQRAFL
NGQFDLVQAEAVADLIASDSDASHRAALTQLRGGFSKQLIDLRQQLIDFVALVELELDFG
EEDVEFAHRDQLRQLMLSIRRVLHPLIESFAAGNVIKNGVATVIVGKPNAGKSTLLNALL
NEEKAIVSDIPGTTRDVIEDELFIDGIRFRLIDTAGLRSATDKIEAIGIERTQQKMRDAA
LVIYLFDAASISTDDLQAALTEVHESGKPYLLVGNKLDALDTARKQQLEAVADESIHWIS
AAQHTNLDALRAALSNRVRTDAAVQIGSAVVTNVRHHDHLTGTDNALARALDGLDSGVTP
DWLAMDLRVALQHLGELTGQITTDDLLDSIFSKFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcattcagaacctattgctgcgctggctacggcacccggtatcggcgctatcgcc
gtcattcgtgtatcgggcgatgacgccattgctatcacgaaccgattcttccggggaaaa
gacctcacgcagcagcccactcatacggctcatttcggcaccctgcgtaaccccgacgac
acaattatcgacgaggtgctggcgaccgtgtttcgggcacctcgttcgttcactaaagaa
gacgttgtcgagatttcgtgccacggatcggagtttatcgtccggcagattttgcagcgg
ctggtggctgagggcgtccggctggcgcggccgggtgagtttacccagcgggccttcctc
aacgggcaattcgatctggtgcaggccgaagccgtggctgatctgatcgcgtctgactcc
gatgctagccaccgcgcggccctgacacagctacggggcgggttctcaaaacagcttatc
gacctccggcaacaactcatcgacttcgtggcgctggtcgaactcgaactggatttcggc
gaggaagacgtcgaatttgcccaccgcgatcaattgcggcaattgatgctcagtatccgg
cgggtgctgcacccactgatcgagtcgtttgccgccgggaatgtcatcaaaaatggcgtc
gcgacggtgattgttggcaaacccaatgcgggaaaatcgacgctgctgaatgcgttgctg
aacgaggaaaaagccatcgtttccgatattcccggcaccacccgcgatgtgatcgaagac
gaactattcatcgacggtatccgcttccgcctgatcgacaccgccggattacggtcggcg
acggataagatcgaagccatcggtatcgaacggacgcagcaaaaaatgcgcgacgcggcc
ctcgtgatctacctgttcgacgcggcttccatcagcaccgacgatctgcaagccgcgctg
acggaagtgcatgagtcgggtaagccgtatctgctggtcggcaacaaactcgacgcactc
gatactgcgagaaagcaacagctggaagctgttgcggacgagtcgatacactggatttcg
gcggctcagcacacgaatctggatgcgctacgggcggccctgtcgaaccgggtccgtacc
gatgccgccgtgcagatcggcagtgccgttgtaaccaacgtgcgtcaccatgatcacctg
accggtacggacaacgccctggcccgcgccctcgacggcctggactcgggcgtaaccccc
gactggctggcgatggacctgcgcgtagccctgcaacacctcggtgagctcaccggacag
atcactactgacgatttgctcgactccattttcagcaaattctgcatcggaaagtaa
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