Spirosoma rhododendri: HH216_12990
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Entry
HH216_12990 CDS
T08048
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00541
Biosynthesis of various nucleotide sugars
srho01100
Metabolic pathways
srho01250
Biosynthesis of nucleotide sugars
Module
srho_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HH216_12990 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srho01005
]
HH216_12990 (kdsB)
Enzymes [BR:
srho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HH216_12990 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
srho01005
]
Lipid A
HH216_12990 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QJD79226
UniProt:
A0A7L5DLD2
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Position
3138508..3139263
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AA seq
251 aa
AA seq
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MIVGIIPARYGSTRFPGKPLTDIGGKPMIQRVLEQAQKAHRLDAVFVATDDERIVAAVEA
AGGRAVMTRTELPSGTDRCQEAYRKLVDDGTLPDDPANYIVNVQGDEPFLNPDQIDGLAA
VLDGSVELATQMAPVESAEVLLSASEVKIIMNARQEALYFSRQPIPYLRGVDPMNWHQHH
TYHRHVGLYAYRADILDKITQLPISSLEQAESLEQLRWLEAGFCIKLVETAHTAQAVDEP
DDVEKALRSAL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcattattcccgcccgttacggctcgacccgctttcccggcaaacccctg
accgacatcggcggtaagcccatgattcagcgggtgctggagcaggcgcagaaagcacac
cggctcgatgctgtcttcgtggcaaccgacgacgagcggattgtcgcggctgtggaagcg
gctggtgggcgcgccgtgatgacccgtacggaattgccaagcggtacagaccggtgtcag
gaagcctatcgcaagctggttgacgatggtaccttgcccgacgatccggccaattacatt
gtcaacgtacagggcgacgagccgtttctgaaccccgatcagatcgatgggttggcggcc
gtgctggacggatcggtggaactggcaacgcagatggccccggttgaatcggctgaagtg
ctgctgagtgcgagcgaggtgaaaatcatcatgaacgcccggcaggaagctctttacttc
agtcggcagccgattccgtacctgcgcggtgttgatccgatgaactggcatcagcaccac
acctaccaccggcacgtgggcttgtacgcctaccgcgccgacatccttgacaagatcacc
cagctacccatttcgtcgctcgaacaggccgaatcgctggagcaactccggtggttggaa
gcgggtttctgcatcaaactagtcgaaacggcccacaccgcgcaggccgtcgatgagccc
gacgacgtcgaaaaagccctccgcagcgcactgtga
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