Spirosoma rhododendri: HH216_14180
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Entry
HH216_14180 CDS
T08048
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srho03400
]
HH216_14180
Enzymes [BR:
srho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HH216_14180
DNA repair and recombination proteins [BR:
srho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HH216_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF188
GGDEF
Motif
Other DBs
NCBI-ProteinID:
QJD79427
UniProt:
A0A7L5DTX7
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All DBs
Position
complement(3439951..3441483)
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AA seq
510 aa
AA seq
DB search
MKTLRLILGDQLNSNHSWFRAPDPDVIYTLMELRQETDYAEHHQQKVIAFFLAMRHFADA
LRAAGHRVDYRTLDDPRNTQSLTQNLTQLLTEYGIDRFEYLLPDEYRLDQQLAEFCASIP
HPTGVQDTEHFYTTRDELARHYGAKKFIMEFFYRKLRQRHNVLMQPPGTPLTGQWNYDEA
NRQPLPKNLTIVPPKLFVRDVTELVQLLERQGVKTMGRLDPTHFIWPVTRAEFLEVLAFF
NADCLARFGTYQDAMHPTEWSLFHARLSFGLNTKLISPREVINSAIAAWQADPERISYAQ
IEGFVRQILGWREYMRGVYWAKMPGFAGLNTFNHTAALPGWYWTGETRMNCLHVALSHSL
DYAYAHHIHRLMITGNFALLLGVHPDAVDAWYLGVYIDAIEWVEITNVRGMSQFADGGVI
GTKPYVSSASYINRMSPYCKSCFYKKDVKVGERACPFNSLYWDFYDRHRSRLESNPRVKM
MYRLWDKMSPGEQSALLEQADRVKQQVESL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcttcgattaatcctcggcgatcagttaaatagcaaccattcgtggttccgc
gcccctgatcccgatgtgatctataccctcatggaactccggcaggaaaccgactatgcc
gagcatcaccaacaaaaggtgatcgcgttttttctggccatgcgccactttgccgatgcg
cttcgagcagcgggtcatcgggttgactaccgaaccctggacgacccccggaatacccag
tcgctgacccaaaacctgactcaactgctaaccgaatacggcatcgaccgcttcgagtat
ctgctgcccgatgagtaccggctagaccaacagctcgctgaattttgtgcctcaattccc
catcccacgggtgtccaggatacggaacatttttacactacccgcgatgaactggcgcgg
cactatggcgcaaagaagttcatcatggaattcttttaccggaagctccgtcagcgacac
aatgtgctgatgcaaccccctggtacgcctttgaccggccaatggaactatgatgaagcg
aaccgccagccgttacccaaaaatctgactattgtgccgcccaagcttttcgtccgggat
gtaacggagctggtgcagctgctggagcgacagggcgtaaaaaccatggggcgccttgat
ccgacgcactttatctggcctgtcacgcgggcggagtttctggaggtgctggcgtttttc
aatgccgactgtttagcccgatttggtacctaccaggacgcgatgcaccctacggaatgg
tcgctctttcacgcgcggctgtccttcggtctgaacaccaagttgatctcaccccgcgag
gttatcaactccgctattgccgcctggcaggccgacccggagcgaatcagctacgcccag
atcgaggggtttgtgcggcagattctgggctggcgtgaatatatgcggggggtgtattgg
gccaaaatgcccggttttgccgggctcaacacgttcaatcatacggctgcgctgcccggc
tggtactggaccggggaaacgcgcatgaactgcctgcacgtagccctgagccactcactg
gattatgcctacgcccaccacatccaccggttgatgattacgggtaattttgccttgctg
ctgggggtgcaccccgacgcggtcgatgcctggtatctgggcgtctacatcgacgcgatc
gaatgggtggagatcaccaacgtacggggcatgagccagtttgcggacggcggtgtgatt
ggcaccaaaccctacgtgtcgtcggcgagctacatcaaccgaatgagtccgtattgcaaa
tcgtgtttttacaaaaaagacgtaaaagtcggcgagcgggcgtgccctttcaacagtctg
tattgggacttttacgaccggcaccggtcgcggctggaaagcaatccccgggtgaagatg
atgtatcggctgtgggataagatgtcccccggggagcagtcggcgctgctcgaacaggcc
gaccgggtcaagcaacaggtggaaagcttgtaa
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