Spirosoma rhododendri: HH216_14345
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Entry
HH216_14345 CDS
T08048
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srho03016
]
HH216_14345 (truA)
Enzymes [BR:
srho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HH216_14345 (truA)
Transfer RNA biogenesis [BR:
srho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH216_14345 (truA)
Prokaryotic type
HH216_14345 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
EZH2_N
Motif
Other DBs
NCBI-ProteinID:
QJD79456
UniProt:
A0A7L5DM15
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All DBs
Position
3483943..3484707
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AA seq
254 aa
AA seq
DB search
MRYFMELSYRGTAYRGWQTQANGVSIQSTLEQAMSKRLGWPVYILGSGRTDAGVHAEQQF
AHFDTDQPLPLTDDLVYSLNCILPDDIAVHAIFPVDESVHARFSAVSRYYQYHITREKNV
FAPGLTLHFRPHLNIDRMNEACQILLRYTDFKSVSKARANVAHFRCELAFAYWTTGPGDR
LTFHIKANRFLWGMVRTIVGMMLEIGQDRLSLDAFDQILQARDRTVAGRAAPANGLYLVE
VEYPEGVLANRPAK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattttatggagctatcgtaccggggaacggcctaccggggctggcaaacacag
gccaacggcgtcagtatacagtcgacgctggaacaggcgatgtcgaaacggctgggctgg
ccggtgtacatactgggtagcggccggaccgatgcgggcgttcatgccgaacagcagttt
gcccatttcgacaccgaccagccactcccgctgaccgacgatctggtgtattcgctcaac
tgcatcctgcccgacgacatcgccgttcacgccatttttcccgtcgatgagtcggtacac
gcccgcttttcggcggtgtcgcgctactaccagtaccacattacccgcgaaaaaaacgtg
ttcgcgccgggcctgacgctgcattttcgaccgcacctgaacatcgaccggatgaacgaa
gcctgtcagattctgctgcgctacaccgacttcaagagcgtgagtaaagcccgtgctaac
gtggctcacttccgctgcgaactggccttcgcctactggaccaccggccccggcgaccga
cttacgtttcacatcaaagccaaccgatttctatgggggatggtccgcacgattgttggc
atgatgctggagatcgggcaggaccggcttagtctcgacgccttcgaccagattctgcaa
gcccgtgaccgcaccgttgccggtcgtgctgcccccgccaacgggctctatctggtcgag
gtagaatatcccgaaggcgtattggcaaaccgcccggcaaagtag
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