Spirosoma rhododendri: HH216_15975
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Entry
HH216_15975 CDS
T08048
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_15975
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_15975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
CarboxypepD_reg
Plug
TonB_dep_Rec_b-barrel
STN
FecR_C
DUF1758
Motif
Other DBs
NCBI-ProteinID:
QJD79756
UniProt:
A0A7L5DMX9
LinkDB
All DBs
Position
3842670..3845978
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AA seq
1102 aa
AA seq
DB search
MEQISCYLPVYRRIVLVVALLLVQWARATQATDLPAPELLSRRISLSIERQSIKSVLRTL
EQTAKVKFSYSPQVVRARQLISLRVQNSTLQDVLNKLLTPLQVSYTVAGEQIILARTVSE
AMTIQLNEAGESIEVVADQTISGVVSDEKGAGLPGVTVAVKGSNRGAVTDASGTYRLTIP
DGPQTLVFSFVGYASQEVAVSNQSTISVQLQPDVKSINEVVVVGYGSLNRKEVTSAVTHL
SSGDLLRVGSNSPLMAVQGKVAGLSITNTAAGDPNSTPSIQLRGVSSRSAGLGPLFVING
IPGGNLDNINQNEIESIDVLKGGAASAIYGTRGSNGVIVITTKKGSDQSRIFYDGYSSFD
FITNKLSVLSKDEFLANNRGVDLGGNTDWMKAVSRNPAFSQKHTLQFSGGNGKTNYFTSL
DYRNATGVDLRSAKQEYGGRVNINHTSANNLYALTFSAAPRYAKTSNADYSGFNYALTLN
PTQPIFDNTGKYAYITSGFFANNPVEQAKSVLSGSEIKYLDINASFKLNLLDNLSTLVTL
GEVSSAFRNFGFTPSTLTTVVNGSGRNSGSQSLDENDQKSFEWTGNYALDAGKHSVKLLG
GYSYQLFTSSGFNAGNENFPSNTLTYNNLGTGLWNLQAGINNVGSYRNSSKLIAFFGRVN
YDFDQKYYLSASVRREGSSKFGYDNKWGYFPAASVGWRITQEKFAQNTGWLNELKLRADY
GVTGNQDFGNYLSLDTYSGYGYYLYNGSSYQVWGPSQNTNYDLRWEKAINFNVGLDFDLF
KNSRLTGSLNYYVRTNKDLLGSYTVPNPPNIQGSTFANVGTMQNSGLEIQLNAAIITGKD
FRYNLTFAGATNSNKFVAFSNEAYQGQTYIDVLGMPAPGSPGNVQRLQENTRIGSFYALR
SAGVNENGALLVYKKDGTVVQGNQANNDDRQFIGNGLPKFTGGLTNNFSYKKWDLTVFLR
GTFGYQIFNTYAFYLGTPATQQNANTLKSAYDGGKYSKLTNPATYSNLSDYFLEPGSFVK
VDNITLSYTQPLNVKYLRSARIYATTRNLATFTKYTGGDPDLVQTNGLYPGINQRVDNGN
TVGTLNYFPSTTQLLLGLQLTF
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaataagctgttatttgcccgtctacaggcgaatcgtgctggtagtcgcgttg
ctgctggtacaatgggcgcgggcgacgcaggccaccgacctgcccgcccccgaattgcta
agtcggcgcattagtctgtccatcgagcgccaatccatcaaatcggtactacgcacgctt
gagcagaccgctaaggtcaaattttcgtacagcccgcaggtggttcgggcccggcagctt
atttcgctgcgtgtgcagaacagtactttgcaggacgtgctgaataaactgctgacgccc
cttcaggtgagctacaccgtagctggcgagcagattattctggcccggacggtatcggaa
gcgatgacgattcagctcaacgaagccggtgagtctatcgaagtagttgccgatcagacc
atctccggggtagtgtccgacgagaagggggcgggcttgccgggtgttaccgtcgccgtg
aaaggctctaatcgcggggccgttaccgatgcgtcgggcacgtaccggttgacgattcct
gacggaccacagacgctggtgttcagctttgtcggctacgcgtcgcaggaggtggcggtg
agtaatcaaagcacgatcagcgtgcagctacagcccgacgtcaagtcgatcaacgaagtc
gtggtcgtgggctatggttcgctgaaccgcaaggaagtgacgagtgcggttacgcacctg
tcgtcgggcgatctgctgcgggtgggcagcaacagcccgctgatggcggtgcagggcaaa
gtggccggtctgtcgattaccaacacggcggctggtgatccgaactcgacgccaagcatt
cagttgcggggcgtgtcttcgcgtagtgccgggctggggccgctgtttgtcatcaacggt
attccgggcggcaacctcgacaacatcaatcagaacgaaatcgagtcgatcgatgtgctg
aaaggcggggcggcatcggccatctacgggacgcggggtagcaacggcgtcatcgtcatc
acgacaaaaaaaggctccgatcagtcgcgaattttctacgacggctacagttcgttcgat
ttcattaccaacaagctgtcggtgctgtcgaaagacgaatttctggccaacaaccggggt
gttgatctgggtggcaacaccgactggatgaaagccgtcagtcgcaacccggcgttctcg
cagaagcatacgctccagttttcgggcggcaacggcaagaccaactacttcacttcgctc
gactaccgcaacgcgaccggcgtcgatctgcggtcggccaagcaggagtacggcgggcgg
gttaacattaaccatacgtcggccaacaacctgtacgcgctgacgttttcggcggcccca
cgctacgccaaaaccagcaacgccgactacagcggcttcaactacgcgctgacccttaac
ccgacgcagcccattttcgataatacgggcaagtacgcctacatcacctcgggtttcttc
gctaacaacccggtcgaacaggcaaaaagtgtgctgtcgggcagcgagatcaagtacctc
gacatcaacgcgtcgtttaaactgaacctgctcgacaacctctcgacgctggtgacgctg
ggcgaggttagttcggccttccgcaacttcggcttcaccccgtcgacgctgacaacggtg
gtcaacgggtcgggccggaactcgggttcgcagtcgctggacgagaacgaccagaaaagc
tttgagtggacgggcaactatgcgctcgacgccggtaagcactcggtgaagctgctgggc
gggtattcgtaccagttgtttacctcgtcgggcttcaacgccgggaacgaaaacttcccg
tcgaacacgctgacgtacaacaatttgggtacgggtctgtggaatttgcaggcgggtatc
aacaacgtcggttcgtaccggaacagctcaaaactgatcgcgttctttggtcgcgtaaac
tacgacttcgatcagaaatactacctgtcggccagtgtgcgtcgggaagggtcgtcgaag
ttcgggtacgataacaagtgggggtatttcccggcggcatcagtcggctggcggattacg
caggaaaaattcgcgcagaacaccggctggctgaacgagctgaaactgcgggccgactac
ggtgtaacgggtaaccaggacttcggtaattatctctcgctcgacacctacagcggctac
ggctactacctctacaacggttcgtcgtatcaggtctggggaccaagccagaacaccaac
tacgatttgcgctgggaaaaagcgatcaatttcaacgtcggccttgattttgacctgttc
aaaaacagccgcctgacgggtagcctgaactactacgtccgtaccaacaaagacctgctc
ggcagttacacagtgccgaacccgcccaacattcaggggtcgactttcgccaacgtgggt
acgatgcagaactccgggctggagattcagctgaacgcagcgattatcacgggtaaggat
tttcgctacaacctgacgtttgccggggctaccaacagcaacaagttcgtggctttctcc
aacgaagcgtatcaggggcagacgtacatcgacgtgcttgggatgcccgcgccgggcagc
cctggcaatgtgcagcggttgcaggaaaacacccggatcggtagtttctacgccctgcgg
tcggcgggtgtcaatgagaacggggcgctgctggtgtacaaaaaagacgggactgtggtg
caaggcaatcaggccaacaacgacgaccgccagttcatcggcaacggtctgcctaaattc
acgggtggtctgacgaacaacttcagctacaaaaagtgggacctgacggtctttctgcgc
ggcaccttcggctaccagattttcaacacctacgctttctatctgggtacgcccgccacg
cagcagaacgccaacacgctcaagtcggcctacgacggcggtaagtactcgaagcttact
aacccggccacgtattcaaacttgtcagattactttctggagccgggtagcttcgtgaag
gtcgataatatcacgcttagctacacgcagccgctcaacgtcaagtacctacggtcggcc
cgcatctacgcgacgacccgcaacctggctacgtttaccaaatacaccggtggcgaccct
gatctggtgcagacaaatggcttgtacccaggtatcaatcaacgtgtcgataatggcaat
accgtcggcacgctgaattatttcccatcaacaacccaactgctgctggggctgcaactc
acgttctaa
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