Spirosoma rhododendri: HH216_16300
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Entry
HH216_16300 CDS
T08048
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srho03000
]
HH216_16300
Transcription factors [BR:
srho03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HH216_16300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_7
HTH_Tnp_ISL3
HTH_23
HTH_11
MarR
HTH_38
HTH_28
Sigma54_DBD
MarR_2
HTH_24
HTH_20
HTH_AraC
HTH_AsnC-type
HTH_Crp_2
HTH_IclR
HTH_Tnp_4
Sigma70_r4_2
CENP-B_N
HTH_3
HTH_5
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QJD79802
UniProt:
A0A7L5DQE7
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All DBs
Position
3922818..3923852
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AA seq
344 aa
AA seq
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MIPPPPITIKDIARQFNCSPSTVSRALNDHYTISEDTRRSIQQYAQQAGYQRNLVSLSLL
NKLSGTLGIIVPTISDSYESSVIEGLHTALRPMGYSLTICVTGESRALEAEYVLRLLANR
VEGIFLSVAQETYDSGHYDHLAMVTQRQLPLVLIDRDYASLPVSRVTADDYHGAWAVVEH
LIQVGCRRIAHLRGPAGLTVSEQRFAGYIDCLTQHGLPICDELILPTNFKIDSAVLPTQQ
LLNLPTRPDAIFGVNDQVAIGAMRVLRERGLRIPDDVAVAGFDDSPTAAYTCPSLTTVAR
SGQKLSAEAARLFLQHKQTPGHTPIESVVLPAQLIVRESSQRVG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcccccgcccataacgattaaagacatcgcccggcaattcaactgctcgccg
tcgacggtgtcgcgggcgttgaacgaccactataccatcagtgaagatacgcgccggagc
attcaacagtatgcgcaacaggcgggttatcagcgaaatctggtgtcgcttagtctgctc
aataagctgtcggggacgttggggattatcgtgccgacgatcagcgatagctacgaatca
tcggtaatcgaagggttgcacacggccctgcggccgatggggtattcgctgacgatctgt
gtaacgggcgaatcgcgggcgctggaagcggagtatgtactgcggctgctggcgaatcgc
gtcgagggaatctttctgtcggtggcgcaggaaacgtacgactcggggcactacgaccat
ttggctatggtgacgcagcggcaacttccgctcgtcctgatcgaccgtgactacgccagc
ctgcccgtcagccgggtgacggccgacgattaccacggagcctgggcggtggtcgagcac
ctgattcaggtgggttgccgacggattgcccacctgcgtggccccgccggactgaccgtt
tcggaacaacgctttgccggttatatcgactgcctgacgcagcacggcttgccaatctgt
gacgagctgattctaccgactaacttcaaaattgacagtgctgtcctgcccacgcagcaa
ctactgaacctacctacccgccccgacgccattttcggcgtcaacgatcaggtggcgatt
ggggcgatgcgggtgttgcgggagcggggactacgcattcccgacgatgtggccgttgct
ggtttcgacgattcaccgacagccgcctacacctgcccgtcgctgaccactgtggcccgt
tctgggcagaaactcagcgctgaagccgcccggctgtttctacagcacaaacaaacgccc
ggccatacgcccattgaaagcgtagtgctgcccgcccaactgatcgtacgcgaatcgtcg
cagcgggtggggtag
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