Spirosoma rhododendri: HH216_16870
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Entry
HH216_16870 CDS
T08048
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH216_16870 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srho01007
]
HH216_16870 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srho03016
]
HH216_16870 (alaS)
Enzymes [BR:
srho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HH216_16870 (alaS)
Amino acid related enzymes [BR:
srho01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HH216_16870 (alaS)
Transfer RNA biogenesis [BR:
srho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HH216_16870 (alaS)
Prokaryotic type
HH216_16870 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
ANC1_spectrin
Motif
Other DBs
NCBI-ProteinID:
QJD79900
UniProt:
A0A7L5DWH6
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All DBs
Position
4064067..4066727
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AA seq
886 aa
AA seq
DB search
MTSSEIRRHFLDFFQSKQHLIVSSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPAKRV
ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIHWAWELLTEVYGLP
KDRLYVSVFEGDQKDNVPFDQEAFDLWEPIVGKDRIIYGNKKDNFWEMGDTGPCGPCSEI
HVDLRSPEEVAQKPGKELVNADHPQVVEIWNLVFMQFNRKADGSLEPLPARHVDTGMGFE
RLCMAIQGKKSNYDTDVFSGTIHVIEELSGKQYTAGTDMGDVAMRVIADHIRAVSFAIAD
GLVPSNSKAGYVIRRILRRAIRYGYSYLNLTEPFMTKLVPTLAIQFAEVFPELNAQRDFV
ATVIREEEIAFLRTLGTGLGRLDQIVSDTKATGSDAIAGETVFELNDTFGFPADLTALIA
REKGLGIDEEGFQKALQEQKTRSRKDAASSAGDWIDLTDMDNRVEFVGYDQPADYAHVVK
YRKIQNKQGTQVQVVLDKTPFYAESGGQIGDTGTLTFTAGGIVTGKLVVLDTKKENDLVI
HLVENVANIDDLLTDADSVYAEIDTTRRAQIAANHSATHLLHAALRDVLGTHVAQKGSYV
GPDALRFDFSHFSKVTDEQLAEVERIVNEKVREDIPLDEQRNVPIAQAKDMGATALFGEK
YGDFVRVITFDPSYSVELCGGTHVYRTGHIGLFKFTAEGSVSTGVRRVEAKTALGAETLV
NEQMAIVTELKDVLKAPKDVVKAVQDLLTERSALQKQIEALQNEKVQQIKNSLLDKVTPS
NGHMVLVERVDVPSADALKQLAYDLKAKIDNLALVLGADINGKPQLAVMLPDSLIQDRKL
NAGQVVKELAKNIKGGGGGQPFFATAGGSDSSGLDAALVQGKELLL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttccgaaatacgtcggcattttctcgacttcttccagtccaagcagcacctg
atcgtttcgtcggccccgctggtcgctaaaaacgaccccacgctcatgttcaacaactcg
ggcatggcgcagttcaaggatttctttctgggtaacggaacacccccggccaaacgtgtt
gccgacacgcagaaatgtctgcgcgtgtcgggtaagcacaacgacctggaagacgtaggc
ttcgacacctaccaccacaccatgttcgagatgctgggcaactggtcgtttggcgattac
ttcaagaaagaagccattcactgggcgtgggaactgctgacggaggtgtacggcctgccg
aaagaccggctgtatgtatcagtattcgagggcgaccagaaagacaacgtgcccttcgat
caggaagcgttcgacctgtgggagcccatcgtcggcaaagaccggattatttacggcaac
aagaaagacaacttctgggagatgggcgatacggggccgtgcggtccctgctcggaaatc
cacgtcgacctgcgctcacccgaggaagtagcgcagaagcccggcaaggaactcgtcaac
gccgaccatccgcaggtcgttgaaatctggaacctcgtgttcatgcagttcaaccgcaag
gccgacggttcgctggagccgctgcccgcccggcacgtcgatacgggcatgggtttcgag
cggttgtgcatggccattcagggcaaaaaatcgaactacgacaccgacgtattttcgggt
acgattcacgtcatcgaagaactgtcgggtaaacaatacacggctggcaccgacatgggc
gacgtcgctatgcgtgtcatcgccgaccacatccgggccgtctcgtttgccattgccgac
gggctagtgccgagcaacagcaaggcgggttacgtaatccgccggatcctgcgtcgggct
atccgctacggctattcgtacctgaacctgaccgagccgttcatgaccaagctggtgccg
acgctcgcgatccagtttgccgaggtattccccgaactgaacgcccagcgcgatttcgtt
gcgacggtgatccgcgaagaagaaatcgccttcctacgtacgcttggcacgggtctgggt
cggctggatcagatcgtcagcgacacgaaagcaacgggtagcgacgccattgctggcgaa
acggtctttgaactaaacgacaccttcggcttccccgccgacctgaccgccctgatcgcc
cgcgagaaagggctgggtatcgatgaagaagggtttcaaaaggcgttgcaggagcagaaa
acccgttcccgcaaagatgccgcgtcgtcggctggcgactggatcgacctgaccgatatg
gacaatcgggttgagtttgtcggttacgatcaacccgccgattacgcccatgtggtgaag
tatcgcaagattcagaataagcagggcacgcaggtgcaggttgtgctcgacaagacgccg
ttctacgcggagtcgggtgggcagattggcgataccggtacgctgacgttcacggcgggc
ggtattgtaacgggtaagctggtggtgctggacacgaagaaggaaaacgacctcgttatt
catctggttgagaatgttgctaacatcgacgacctgctgaccgacgctgattcggtgtac
gccgaaatcgatacgacgcgccgggcgcagattgccgctaaccactcggcgacgcacctg
ttgcatgcggccctacgcgacgtactgggtacgcacgtggcgcagaaagggtcatacgtc
ggtcccgacgccctgcgcttcgacttctcgcacttttcgaaagtaaccgatgagcaactg
gccgaagtcgagcggattgtaaacgagaaagttcgcgaagacattccgctcgatgagcag
cgtaacgtacccattgcgcaggcgaaagacatgggcgctacggccctgttcggagagaaa
tacggcgacttcgtccgggttattaccttcgaccccagctactcggtcgaactctgtggc
ggcacgcacgtctaccggacggggcatatcggtctgttcaagttcaccgctgaaggttcg
gtatcgacgggcgttcggcgcgtcgaagccaagactgcgctgggtgccgaaacgctggtc
aacgagcagatggcgattgtaacggaactgaaggacgttctgaaagcaccgaaggacgtg
gtgaaagccgtgcaggatttgctaaccgagcgcagcgcgttgcagaagcagatcgaggcc
ctgcaaaacgagaaagtgcagcagatcaaaaacagcctgcttgataaagtgacgccatcc
aacgggcacatggtgctggtcgagcgcgtcgacgtaccatcggcggatgcgttgaaacaa
ctggcctacgatctcaaagccaaaatcgacaacctcgcgctggtgctgggtgccgacatc
aacggcaagccccaactggccgtcatgctgcccgattcactgattcaggaccgcaagctg
aacgctggtcaggtggtgaaagaactggctaaaaacatcaaaggcgggggtggtggccaa
cccttcttcgcgaccgccggtggctccgattcgtcggggctggatgcggctctggtgcag
gggaaagaactgcttttgtga
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