Spirosoma rhododendri: HH216_18890
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Entry
HH216_18890 CDS
T08048
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00521
Streptomycin biosynthesis
srho00523
Polyketide sugar unit biosynthesis
srho00525
Acarbose and validamycin biosynthesis
srho00541
Biosynthesis of various nucleotide sugars
srho01100
Metabolic pathways
srho01110
Biosynthesis of secondary metabolites
srho01250
Biosynthesis of nucleotide sugars
Module
srho_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HH216_18890
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HH216_18890
01055 Biosynthesis of vancomycin group antibiotics
HH216_18890
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HH216_18890
00525 Acarbose and validamycin biosynthesis
HH216_18890
Enzymes [BR:
srho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HH216_18890
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
QJD80254
UniProt:
A0A7L5DP37
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Position
complement(4546568..4547548)
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AA seq
326 aa
AA seq
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MKRVLITGGAGFLGSHLCDRFIKEGYHVIAMDNLITGDIRNLEHLFKLPNFEFYHHDVSK
FIHVPGELDYILHFASPASPIDYLKIPIQTLKVGSLGIHNCLGLARVKKARVLIASTSEI
YGDPTIHPQPEEYWGNVNPVGPRGVYDEAKRFQEAMTMAYHTYHGLETRIVRIFNTYGPR
MRLNDGRVLPAFIGQALRGEDLTVFGDGSQTRSFCYVDDLVEGIYRLLLSDYAYPVNVGN
PSEITIKEFGEEIIKLTGTTQKLVFKELPKDDPKQRQPDITKAKAILGWEPKVSRSEGLR
ITYEYFKNLPEEELYHAAYHREFAKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtacttattaccggcggggccggctttttgggctcgcacctgtgcgaccgg
tttatcaaggaagggtatcacgtaattgcgatggacaacctgatcacaggcgacatccgc
aaccttgagcacctgttcaaactgccgaatttcgagttctatcaccacgacgtatcgaag
ttcatccacgtgccgggtgagctggactacattctgcacttcgcgtcgccggccagcccg
atcgattacctgaaaatcccgattcagacgctgaaagtgggatcgctgggtattcacaat
tgcctgggtctggcgcgggtgaagaaagcccgcgtgctgatcgcatcgacgtcggaaatc
tacggtgacccgacaatccacccacagcccgaagagtactggggtaacgtaaacccggtt
ggcccgcgcggtgtgtacgacgaagccaagcgttttcaggaagcgatgacgatggcctac
catacctaccacgggctggaaacgcgcattgtccggatttttaacacctacggcccccgc
atgcggctgaacgacggtcgggtattgcccgctttcatcggccaggccctgcgcggtgaa
gacctgacggtgtttggtgatggtagtcagacgcgttcgttctgctacgtcgacgatctg
gtagaaggcatctaccgcctgttgttgagcgactacgcttacccggtcaacgtcggtaat
ccgtcggagatcacgatcaaagagtttggcgaggagatcatcaagctgaccggcacaacg
cagaagctggttttcaaagagctgcccaaagacgatccgaagcagcggcaacctgatatt
accaaggcgaaagcgattctcggctgggaaccgaaagtttcccgttcggaaggattgcgc
atcacctatgaatacttcaagaacctacccgaagaagagctgtaccacgcggcttatcac
cgggagttcgctaaaaaatag
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