Spirosoma rhododendri: HH216_19175
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Entry
HH216_19175 CDS
T08048
Name
(GenBank) RHS repeat protein
Organism
srho
Spirosoma rhododendri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
Bacteriocin_IIi
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QJD80308
UniProt:
A0A7L5DUN8
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All DBs
Position
complement(4602110..4605109)
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AA seq
999 aa
AA seq
DB search
MTTTPAFRTGLRRLLYPAIAQAIPPETDERAQLADLLHRLDLTLADYQTLPGMHRVLDGR
AVDVATGEVVLDTTDITIPGPVPFAWGRYWRSNHLTSGSVGNGWRHSYDYTLLEDRRTRQ
VVVRTPDSRAVVFALLTDGESAQNRLEKVRLDRDARGYVLHRTNGLRYRFADNPSGSLCR
LVAVERVGLAYRLQFTYNQLGQLFRISDGGQRVVELTTNAGGHISQLTLTAPDATQQRIV
LAQYRYDEAHNLTEAAAFDRPATQYYYRQQRIIRLNDTLRRSIFFAYTNVDKVFRCTDVR
QEAGRVAQFRYFPDEGRTVVTDEAGHVRQYIHEAGVVQRFMSAEGRQRVWFHNEYHELIS
EQDPLGNTTFLTYDERGNLTQTTWPDGGTMAMTYDDTDLLLTLTDRAGGVWQWSHDPAGQ
LLLCIDPAGAETRFSYDTAGLRIGRQTAGQVVRWEYDASANPVRQLTAAGQTNWSFDALG
RLTFAGRSTETVPLFPVEPLPALAANGTSDDYQPVYDADGQLVRLRRGRLNWQFIRDAAG
GIREYTRPDGQSTRFHYDAAGRLTEALFSDGSWHHYAYRPDGWLIEATSPTTQVRFVRNA
RGQISEEVAGEQSVQSTHDPAGNRISRQVAGGEAVTFTYNVQGQLSKLTHPAGALWLAHD
RQGRLTEQVWPGGLRCRWQYTDGRLPVSQSVYWRSQLNAGRLLNYGWAGRQLSRVQDARH
GTVDLRYDPAGAVVEAVCSAGWTDRWVADRRAWQQRLLRPAADTTEPGWQLIVVGGMRFY
YDAEGYLREKRIAGKTWSFHWHESGVLTRVVQPDGQAVTFTYDALGRRIDKQVGDKSVRW
AWDGKRLAQEWHQQGDNAPVQLTWYTVDSAALSSGVLSSTAPVLLQVGSQIYSVVCNQLG
QPLSMHAPTGEPVWEYGWYLFGKKYGLTGPHHWHTYLGPNQFDVPEAGLVYTDFQYADAD
TGLPLSPEYSSPAGWARAEWVLPHAPESYLSAARYIRAY
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgactacgacccccgcgtttcgtaccggcctgcgccggttactgtacccggccattgcg
caggccattccgcccgagaccgacgaacgggcgcaactcgctgatctgctccaccggctc
gacctgacgcttgctgattaccagacactgccaggcatgcaccgggtactcgacgggcgg
gcggtcgacgtggcaacgggcgaagtggtgctggacacgacggatatcaccatccccgga
ccggtgccgttcgcgtgggggcggtactggcgctccaatcacctgactagtggatcggtg
ggaaatggctggcggcattcgtacgactacacgctgctcgaagaccggcgcacccggcag
gtcgttgtccggacacccgatagccgggcggtggtgtttgcgctgctgacggacggcgaa
tcagcacaaaaccggctcgaaaaggtccggctcgaccgcgacgcgcggggctacgtactg
caccggaccaacgggttacggtaccgcttcgccgacaaccccagcggaagcctgtgccga
ctggtggcggtcgagcgggtgggcctggcgtaccggcttcagtttacgtataatcagctc
ggtcagctgttccgcatcagcgacggtgggcagcgcgtagttgagcttacgaccaacgca
ggcggacacatcagtcaattgacgctgaccgcccccgacgccacgcagcagcgcatcgtg
ctggcgcagtatcgctacgacgaggctcataacctgaccgaagcggccgcattcgaccgt
ccggcgacgcagtactactaccggcagcagcgcattattcgcctgaacgacaccctgcgc
cggtccatcttttttgcctataccaacgtcgacaaagtgtttcggtgtaccgacgtccgg
caggaggccgggcgcgttgcgcagtttcgctacttccccgacgaggggcggacggtagtg
accgacgaagccgggcacgttcggcaatacatccacgaagcgggggttgtgcagcggttt
atgagtgccgaagggcggcagcgcgtctggtttcacaacgagtatcacgaactgatcagc
gagcaggacccactgggtaacaccacatttctcacctacgacgagcggggcaacctgacc
caaaccacctggcccgacggtggtacgatggccatgacctacgacgataccgatctgcta
ctgaccctgaccgaccgcgccggtggcgtctggcagtggagccatgaccccgccgggcaa
ctgctgttgtgcatcgacccggcgggggctgaaacacgcttttcttacgatactgcaggg
ctacgcattggtcggcagacggccgggcaggtggtgcgctgggaatatgacgcgtcggcc
aatccggtgcggcagctgaccgctgcgggacaaaccaactggtcattcgacgcgctcggt
cggcttacatttgctggccggtccaccgagacggttcccctgtttccggtggagccgtta
cccgctttggctgcgaatggaacatccgacgattatcagccagtttatgatgccgacggg
cagctcgtgcggttgcgccgggggcggctcaactggcagtttatccgggacgcggctggg
ggtattcgggagtacacgcgccccgacggccaatcgacgcgcttccactacgatgccgct
ggtcggctgaccgaagcgctattcagcgatggtagctggcaccactacgcgtaccgcccc
gacggctggctgatcgaagcgacatcgcccacgacgcaggtgcggttcgttcgcaacgca
cgggggcaaatcagcgaagaagtggcgggtgagcagtcggtacaaagcacccacgacccg
gccggaaaccgcatcagtcggcaggtggcgggtggagaagccgttacgttcacgtataat
gtacaggggcagttgagcaaactgacccacccggcgggggcgctgtggctggcccacgac
cggcagggacgactgacggaacaggtgtggccgggcgggctgcgctgtcgatggcagtat
accgatggtcggttgccggtcagtcagtcagtgtattggaggagtcagttaaacgcgggt
cggctgctgaactacggctgggccgggcggcaactcagtcgggtccaggacgcccggcac
ggcaccgtcgatctgcgctacgacccggctggcgcggtggttgaagccgtctgctcggcg
ggctggacggatcgctgggttgccgaccgacgtgcctggcagcaacggttactgcgtccc
gctgccgacacaaccgaacccggctggcaactgattgtcgtggggggaatgcgcttctac
tacgacgccgaaggctacctgcgcgaaaaacggatcgccgggaaaacgtggtcgttccac
tggcacgagtcgggtgtgctgacgcgcgtcgttcagcccgacgggcaggccgttaccttc
acctacgacgcgctgggccgacgcatcgacaagcaggtgggtgacaaaagcgtgcgctgg
gcgtgggatggtaaacggcttgcgcaggagtggcatcaacagggtgataatgcgccggtg
cagctaacctggtatacggtggatagtgcggcactatccagcggggtactatccagtacg
gcacccgtgttgctacaggttggaagtcagatctacagcgtcgtgtgcaatcagctgggg
cagccgctgtcgatgcacgcgccaacgggcgaacccgtctgggaatacggctggtatctg
ttcggcaaaaagtacggcctgaccggcccccaccactggcacacgtacctcggtcccaat
cagttcgacgtgcccgaagccgggctggtgtacacggattttcagtacgccgacgctgac
accgggttgccgcttagtccagaatattccagccccgccgggtgggcgcgagctgaatgg
gtgcttcctcacgcaccagaatcgtatctttccgctgcccgatatattcgagcgtactga
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