Spirosoma rhododendri: HH216_21010
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Entry
HH216_21010 CDS
T08048
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srho03000
]
HH216_21010
Transcription factors [BR:
srho03000
]
Prokaryotic type
Helix-turn-helix
XRE family
HH216_21010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_26
HTH_19
HTH_25
Peptidase_M78
HTH_73
HTH_24
CYNS_N
HemN_C
Motif
Other DBs
NCBI-ProteinID:
QJD80618
UniProt:
A0A7L5DVJ0
LinkDB
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Position
complement(5047575..5049065)
Genome browser
AA seq
496 aa
AA seq
DB search
MTLPADHIRLLFGLKLRQLRLDKGLSASDLAQKSGLSVSYVTEIEKGRKYPKADKIAALA
SAMQVDYDTLVSLKLSKKLEPISDLLRSKFLTEVPLELFGIDPSDLLELLSDAPAKVSAM
IRTFMDIAQTYNMSVERLYLTMLRSYQEMHDNYFPEIEAAADSFLGEFMAPEQVVSDTLL
VNLLKTRYEIQIEQFDPADQPELTALRSIYRPERRTLHLNASLNTAQRTFILAREVAFQY
MGLKIRPYTYSWVEAESFEQILNNYRASYFAGAILIRRDVLVAKLTDLFNRSTWSNEAFL
QLIQDFGSTPERFFYRLSNVLPSQFGIDQLFFYRFNHTAGETNFQLTKEMHLSRQQGGGP
RGIVDEHYCRRWIALTILQELHFLQQNKGIDSTLCRAQLSEYADSGQQYLIISVAHSHRP
EAQQNMSVSMCFAVNDALRSRMKFMQQPSADVPYRLVNEACERCGIFDCRERVAAPIVLQ
KKRQFAAMKQALGKLA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgacccttcctgctgaccatattcgattgctgtttggtttgaaactgcggcagttgcga
ctcgacaaagggctgtcggccagcgatctggcgcagaagtccggcctgtcggtttcgtac
gtcaccgaaatcgaaaagggccgaaaatacccgaaggcggataagatcgcggctctcgcc
agtgctatgcaggtcgactatgacacgctggtatcgttgaagctgagcaaaaagctggag
ccgatttccgacctgctgcgctcgaaattcctgaccgaagtaccgctcgaactgtttggt
atcgacccgtcggacctgctcgaactgctgtctgatgcgcccgccaaagttagcgccatg
atccgcacgttcatggatattgcccagacgtacaatatgagcgtcgaacggctgtatctc
acgatgctgcggtcgtaccaggaaatgcacgacaattatttcccggaaatcgaagcggct
gccgatagctttctgggtgagtttatggcaccggagcaggtcgtgtctgatacgctgctg
gtcaatctgctcaagacccgctacgaaatacagatcgagcagttcgatccggctgatcag
cccgaactaacggcactgcgctcgatataccgccccgaacggcgcacgctgcacctcaac
gccagcctgaacacggcgcagcgcacattcattctggcacgggaagtggcttttcagtac
atgggattgaaaattcgcccatatacgtactcgtgggttgaagccgagtcgttcgagcag
attctgaacaactaccgggcgtcgtacttcgccggggctatcctgatccgacgcgatgtg
ctggttgccaaactaacggatctgtttaaccgaagcacctggagcaatgaggcttttctg
caactgattcaggattttggctcgacacccgagcggtttttttatcggctcagcaacgta
ttgcccagtcagtttggcatcgatcagctgttcttctaccggttcaaccacacggcgggc
gaaaccaacttccagctgacgaaagagatgcacctgtcgcggcagcagggtggcggaccg
cgcggtatcgtcgatgagcactactgccgccggtggatagccctgacgattttgcaggag
ctgcattttctccagcagaacaaaggcatcgacagtacgctttgccgggcgcagttgtcg
gaatacgccgattcgggacagcagtacctgattatttcggtggctcattcgcaccgcccc
gaagcgcagcagaacatgagtgtgtcgatgtgttttgcagtcaacgatgccctgcgcagc
cgaatgaagtttatgcagcagccctcagccgatgtgccttatcggttggtcaacgaagcc
tgcgaacgctgtggcattttcgactgtcgcgagcgtgtagcagcgcccatcgtcctccag
aaaaaacgccagtttgccgccatgaagcaggccctaggaaagctggcgtaa
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