Spirosoma rhododendri: HH216_21480
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Entry
HH216_21480 CDS
T08048
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srho03000
]
HH216_21480
Transcription factors [BR:
srho03000
]
Prokaryotic type
Helix-turn-helix
XRE family
HH216_21480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
Peptidase_M78
HTH_26
HTH_25
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QJD80704
UniProt:
A0A7L5DQG5
LinkDB
All DBs
Position
complement(5157709..5159208)
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AA seq
499 aa
AA seq
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MTSDREKVRLIFGLKIKQLRGELGLSTYDLADKTGLSPSYLNEIEKGKKYPKTEKVFALA
KALNSTYDTLVSLQVNKALEPVVELLNSNILNELPLDLFGIEPTYFLEVMANAPAKLSAF
INTLIEIGRNYDLSVEQFYFSVLRTYQAMHHNYFEELEAQADAFLTDNPLPQLPEQRTDW
LISILNQTYQCTVEFYDETTQPALLSLRSVYLPEQSKLLVNNKLSTEQRVFTLAREVGYH
RLNQTVRPLESSVLEARSFDEVLHNFQASYFARCILIPRSRLLDELRTLVQQPNWSNDRM
LGMLAEAAVTPEMFLLRVTNLLSGYFELNDLFFLRFNQLASGRFLLAKELHLSKLHTPHG
VARDEHYCRRQVSVTILNELRQLQQSGQWDGQPICRAQRISFATNDTTYFVFSIAKSSPP
TTDNSSVNIGFPITDTLLERLPFIGDPSLPTTPVGETCERCPIADCTVRAAPPTELNQQQ
RTAHIQQTIAQLRAGNQPA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagaccgggaaaaagtgcggctcatttttgggctgaaaatcaagcagctacgt
ggggagcttggcttgtcgacctacgacctcgccgacaaaacgggcctgtcgccgtcgtat
ctcaatgagatcgagaaaggaaaaaaatatcccaagaccgaaaaggtgtttgcgctggcc
aaagccctcaacagcacctacgatacgctggtgtcgttgcaggtcaataaagcgctggag
ccggttgtagagttgcttaactcaaacatcctgaacgagttgccactcgacctgttcggt
attgagccgacgtattttctggaagtgatggcgaatgcacccgccaagctgagtgcgttt
atcaacacgctgattgagattggccgcaactacgacctgagcgtcgagcagttttatttc
tctgtgttgcggacgtatcaggccatgcaccacaattatttcgaggaactcgaagcgcag
gccgatgctttcctgaccgacaatccgctgccgcaactgcccgaacaacgcaccgactgg
ctaataagcattctgaaccaaacgtatcaatgcacggtcgagttttacgacgaaaccacc
cagccagccctgctgtcgctgcggtcggtgtatttgccggagcaaagtaaattgttggta
aataacaagttatcgacagagcagcgggtgtttacgctggcgcgggaagtggggtatcac
cgactgaaccagacggttcgcccgctggaatcgtcggtgctggaagcccgttcattcgat
gaggtgctgcataattttcaggcgtcgtacttcgcccgctgtatcctgattccccggtcg
cggctgcttgacgaactgcggacgctggtgcagcaaccgaactggagcaacgaccggatg
ctggggatgctggcggaggctgccgtgacgccggaaatgtttctgttgcgcgtaaccaac
ctgctgtcgggctatttcgagttgaacgacctgttctttctgcggttcaatcaactcgcc
agcggccggtttctactggcgaaagaattgcacttaagcaagctgcacaccccgcacggt
gtcgcccgtgatgaacactattgccgtcggcaggtatcggtcacgatcctgaacgaactc
cggcagcttcagcagtcggggcagtgggacgggcaacccatttgccgggcgcagcgcatc
tcgtttgccaccaacgacacgacgtatttcgtgttttccatcgccaaatcgtcgcccccc
accaccgacaacagcagcgtcaacatcggttttcccatcaccgataccctgctcgaacgg
ttacctttcatcggcgaccccagcctgcccactacgcccgtgggagaaacttgcgaacgc
tgcccaattgccgattgtacggtccgggccgctccgcctaccgaactgaatcagcagcag
cgaaccgcccatattcagcagaccattgcccagttacgggcgggtaatcaaccagcgtaa
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