Spirosoma rhododendri: HH216_22000
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Entry
HH216_22000 CDS
T08048
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
srho02022
]
HH216_22000
Two-component system [BR:
srho02022
]
NtrC family
Unclassified
HH216_22000
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
AAA_19
MCM
TIP49
VMAP-M12
TsaE
Motif
Other DBs
NCBI-ProteinID:
QJD80793
UniProt:
A0A7L5DU08
LinkDB
All DBs
Position
complement(5272109..5273467)
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AA seq
452 aa
AA seq
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MPATILLIDDEPRLRSLLARILSLEEYRVLEAEDARSGLKTLERETVELVISDVKLPDKN
GIALAEEIKKRYPATEIIVLTAYGTIADGVTAIKNGAFDYIVKGDDNEKIIPLVSRAVEK
AQLQFRIQRLEAQVNKQYSFDPIVGQSRVIQQAVDLARRVAVTDTTVLLMGETGTGKEVF
ARAIHGGSPRRKGPFVAINCGALGKDILESELFGHRAGAFTGASRDQKGLFAEADKGTIF
LDEIGEMPLDLQAKLLRVLETHEFLRVGDTRPTHTDVRVVAATNRHLAQEAEVGHFRLDL
YYRLSVFSIDLPPLRERLGDVPVLAEQFARQEAAKIGRRDVRLSDGFVQRLKQHYWKGNI
RELKNIIERAVILSDSSELTPDLLPYDMQTGAAAEPSNDADTFDLATRERQLIRRALRHT
NGNKTEAARLLGIGLTSLYRKLAEMDADTPTS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgctaccatcctcctcatcgacgacgaaccccgcctgcgcagtttattggcccgt
atcctgagcctggaagagtacagggtgctggaagcggaggacgcccgcagtggcctgaaa
accctcgaacgcgaaacggttgagctggtcatcagcgatgtcaagctgcccgacaaaaac
ggaattgccctcgcggaagaaatcaaaaagcggtacccggccaccgaaattatcgttttg
accgcttacggaaccatcgccgatggggtgacggccatcaaaaacggcgcgttcgattac
atcgtcaaaggcgacgacaacgagaaaataatcccgctcgtgagccgggctgtcgagaaa
gcgcagttgcagttcaggattcagcggctggaagcgcaggtcaacaagcagtacagtttc
gaccccatcgtggggcagtcgcgggtcattcagcaggccgtcgacctcgcccgtcgcgtt
gccgtgaccgatacgacggtgctgctgatgggcgaaaccggtacgggaaaagaagtgttt
gcgcgagcgattcacggtggtagcccccgccggaaaggcccgtttgtcgcgataaactgc
ggagcgctgggtaaagatattctggaaagcgaactgtttggccaccgcgccggtgccttt
accggtgccagtcgtgaccagaaagggctgtttgcggaagcagacaagggaacgattttt
ctggatgaaatcggggagatgccgctcgatttacaggccaagctgctgcgcgtgctggaa
acgcacgagtttctgcgcgttggcgataccagacctacccataccgacgtgcgcgttgtg
gcggccacgaaccggcatctggcgcaggaagccgaggtgggccatttccggctcgattta
tactatcgactatcggtattcagcattgacctgccccccctgcgtgagcggctcggcgac
gttcccgtactggccgagcagtttgcccggcaggaagccgccaagattggtcggcgcgac
gttcggctgagcgatgggtttgtgcagcggctgaaacagcactactggaaaggcaacatc
cgcgagctaaaaaacatcatcgaacgggccgttatcctgtcggactcatcggagctgacg
cctgatctgctgccctacgacatgcagacgggagcagccgcagagccgtcgaacgatgct
gacacgttcgaccttgccacgcgtgaacggcaactgattcgccgggcactgcgccatacc
aacggcaacaaaaccgaagccgcccgtctgctcggtatcggcctgacgagcctgtaccgc
aaactggccgaaatggacgccgatacgccgacgtcctga
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