Spirosoma rhododendri: HH216_22865
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Entry
HH216_22865 CDS
T08048
Name
(GenBank) HAMP domain-containing histidine kinase
Organism
srho
Spirosoma rhododendri
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_5
HAMP
HATPase_c_2
DUF389
Motif
Other DBs
NCBI-ProteinID:
QJD80946
UniProt:
A0A7L5DR95
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Position
complement(5445423..5449253)
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AA seq
1276 aa
AA seq
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MKRIEQHIFLVLAILAFALSVLCYWFLEQNAPGAADEQYLSAVQQRVKDEMRVSSDELQQ
MTTRLQQVPALTFRNLSSQSRFPYYIFQKKRGQAGPPSLLYWSDNQFIPDYNRIATITYP
RLVSFDGGRYIVSRQRVIRNADTLNVFSLVNVYRQYRTDNSYLHSGYNPDLFATDPTAIT
DDRSKPYQVIYDNTPIFLFSVVPPKVLAYQNQTTPVNTIILAALSVIFLGLYVFQIMIQL
QQARRYGWGFLWLATYLLVLRALMLYFGVPFLFVESDLFNSRFYKSSALVPSLGDLLLNS
IVVLMLALYWVNNYYRSWQYSRLLQLPDRARQGLSIVLVILGYAVFTVCYAEINNIYEKS
QFTLDITLSIQFTVLKVACLLIFISISTIYFLLTHLLASLFVRFNRVGWGGLLWLIIGTG
LSFVWVYVAGLPMEPVLFLNGIYWLLLYRYQFPRSLYMFRYKTSIYLFLAAFVSAAATAY
VVYQQELHKQLTQKQAFGRRILAENDELGEFLMSKAQKAIATDTDIAQTLRNDTLKFQRQ
QIQARVKGVYLDRYFDKYTIDVMSFRANGQPTDVLPGATRLTALNNLYRQPTYQTAYPGI
YLLNKATQQSFKQYVCFIPIRGTADSVRTADTLGYVVIDFRLQNERPESPYPEQLVDTRF
IQQPDMPEYSYAIYSGPGPGGKPLPKLLYSAGSYNYERRMPLSMLTDPALFQTGIVVNEG
RHVGLWGKGGQLVVVSSVGYPLKNAFSNFSFLYLLLVLTVIVVIILYAVHYSRSRFSINY
STRIQILLNLAFFLPLVLVIVIILTVISNNYITNQENTYVTNTRNVAANLVTALDEAKTE
RRSKASVEEELGKLARDAGIDLNLYDPQGRLYSSTRPLIYESGYLSKQINPEAYVHLVEE
KENQVLLSESLGRKQYSTAYASIKSFDGRLLGILGVPYFYAQPELDQQLIEVISSALSIF
TILFLFFLILSYFASILLTKPLKILTGKISKTNLDQLNETLPWRSDDEIGMLIREYNRML
EKLQENKLALAQTEKQSAWQEMAKQVAHEIKNPLTPMKLTLQHLQRTLPGMQPATATARP
ANDATTRRVMQRTFDSLLDQIDNLSDIATSFSDFAKMPMPKNETFEVTSVINKAADLYAD
DQRISLSRQIANGPLMVIGDRQLIGRILTNLLINAIQSVPADRKPTIELRVYTHEESVRI
ELHDNGAGIPEAIQAKVFLPNFSTKRGGSGLGLAIAKRGVEHAGGNIWFETTEGVGTSFF
ISLPIAEVPTPIARPV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgaattgagcaacatatctttctggtactggctattctggcatttgcgctgtcg
gtactctgctactggtttttggagcagaatgcccccggcgcggccgatgagcagtatctg
agtgcggtgcagcagcgggtgaaagacgaaatgcgggttagttccgacgaactacagcag
atgaccacccgcctacagcaggtacctgcgctaacattccgtaacctgagcagccaaagc
cggtttccatactacatttttcaaaagaagcggggacaggcaggtccgcccagtttgctg
tactggtctgacaatcagtttattcctgactacaatcgaatcgccacgattacatacccc
cggctggtttcgtttgatggggggcgatacatcgtcagcaggcaacgggttattcgtaat
gccgacacgctaaacgtgttttcgctggtgaatgtgtaccggcagtaccgcaccgacaac
agctacctgcattccggctataaccccgatttgtttgccactgatccgacggccatcacc
gacgatcgcagcaagccgtatcaggtcatttacgacaacacgccgatctttctgttctcg
gttgtaccacccaaggttctcgcttatcagaaccaaacgacgcccgtcaatacgattatt
ctggccgcgctgagcgtaatttttctggggctgtacgtattccagattatgatacagctt
cagcaggcgcgtcggtacggctggggctttctctggctggcgacttacctgctcgtgctg
cgggcgctgatgctgtatttcggggtaccatttctgttcgtcgaatcggatttgtttaac
tcccggttctacaaatcatcggcgctggtgccgtcgctgggcgatttgttactcaactcg
attgtggtgctgatgctggccctgtattgggtcaataactattatcgctcctggcagtac
agccgattgctgcaactgcccgaccgggcgcggcaggggctgtcgatcgtgctggttata
ctggggtatgcggtgtttacagtttgctacgccgaaatcaacaacatttacgagaagtcg
cagttcacgctcgacattacgctcagcattcagtttacagtcctgaaagtggcgtgtctg
ctgatcttcatttcaatctcgacaatctattttctgctgacgcatctgctggccagcctg
tttgttcggttcaaccgggtggggtggggcggtctgctgtggctgattatcggtacgggc
ctatcgtttgtgtgggtctacgtggcggggctgcccatggagccggtcctatttctgaac
ggtatttactggctattactgtaccggtatcagttcccacggtcgttgtacatgtttcgg
tacaagacctcgatttatctgtttctggctgcgttcgtttcggcggctgctaccgcttac
gtcgtttaccaacaggagttacacaagcaactgacgcagaaacaggcgtttgggcgtcgg
attttggctgagaacgatgaactgggcgaattcctgatgagtaaagcccagaaggccatt
gccaccgataccgacattgcccagaccctgcgcaacgacacgctgaagtttcagcggcag
cagatacaggcccgggtaaaaggcgtgtatctggaccggtacttcgataagtataccatt
gacgtgatgtcgtttcgggccaatgggcaacctaccgatgtgctgcccggcgctacccga
ctgacggccctgaacaacctgtaccgccagcctacctaccagaccgcttacccgggtatc
tacctgctcaacaaagcaacgcagcagtcttttaaacagtacgtctgttttattccgatt
cggggcaccgccgattcggttcgtaccgccgatacgctggggtatgtcgtgatcgatttt
cggttgcagaacgaacggccggagagcccgtacccggagcaacttgtcgatacgcgcttt
attcagcagcccgacatgccggaatacagctacgcgatttacagcggtccggggccgggt
ggcaaaccactgcccaaactgctgtacagcgcgggcagctataactacgagcgccgaatg
cccctgtcgatgctgacagatccggccctgttccagacgggcatcgtcgtcaacgagggg
cgtcacgtcggtttgtgggggaaaggtgggcagttggtcgtggtgtcttcggttgggtat
ccacttaagaatgcgttctccaatttctcgttcctgtacctgctgctggtactgaccgtc
atcgtcgtcattatcctgtacgcggttcactacagccggtcgcggttcagcatcaactat
tcgacccggattcagattctgttgaacctggcgtttttcctgccgctcgtattggttatc
gtcattattctgacggtcatcagtaacaactacatcaccaaccaggaaaacacctacgtt
actaatacgcgcaacgtggctgccaatctggttacggcgcttgacgaggccaaaaccgaa
cggcgaagcaaagcatcggtcgaggaagagctgggcaaactggcccgtgacgctggtata
gacctgaatctgtatgatccgcagggacgcctgtacagttcgacccgcccactgatctac
gaaagtggctacctctcaaagcagataaacccggaggcatacgttcacctagtcgaagaa
aaagagaatcaggtgctgctcagcgaatcactaggccggaagcagtacagcaccgcctac
gccagtatcaagtcgttcgatgggcggctattgggtattctgggcgtaccttatttctac
gcccagcccgaactcgatcagcagttgatcgaggtgatttcgtcggcgctgagcatcttc
acgatcctgtttctgttcttcctgatcctgtcgtatttcgcatcaatcctactgaccaaa
ccgctgaaaattctgacgggaaagatcagcaaaacaaacctcgaccagctaaacgaaacc
ctgccctggcgctccgacgacgagatcggtatgctgatccgggagtataatcggatgctg
gagaaacttcaggaaaacaagctggcactggcgcagaccgagaagcagtcggcgtggcag
gagatggcgaagcaagtggcccacgagatcaaaaatccgctgacgcctatgaagttaacg
cttcagcatttgcagcggacactacccggcatgcaacccgccactgccactgcccgccca
gccaacgatgcgactacgcgccgggtgatgcaacgcacgttcgactcgctgctcgatcag
attgataacctgagcgacattgcgacctcgttttctgacttcgccaagatgccgatgccg
aagaacgagacgttcgaagtaacgtcggttatcaacaaagcggctgacctgtacgccgac
gatcagcggattagtctgagccggcagattgccaatgggccactgatggtaatcggggat
cggcaacttattgggcgaatcctgacgaacctgctcatcaacgcaattcaatcggtaccc
gccgaccgcaagcctacgattgagttgcgggtgtacacacacgaagagtccgtacgtatc
gagctacacgacaacggtgccggtatccccgaagctattcaggctaaggtatttctgccg
aacttcagtaccaaacggggcggttccgggcttggtctcgccattgccaagcggggtgtc
gaacacgccggtggaaacatctggtttgaaacaacagaaggggttggcacttccttcttt
atatcgttgccgatagcagaagtgccaacccctattgcaaggcccgtttga
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