Spirosoma rhododendri: HH216_24085
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Entry
HH216_24085 CDS
T08048
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
srho
Spirosoma rhododendri
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_24085
Transporters [BR:
srho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HH216_24085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QJD81160
UniProt:
A0A7L5E077
LinkDB
All DBs
Position
complement(5713320..5714819)
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AA seq
499 aa
AA seq
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MNTIQKTIAYGLLSGLVLTSGCSKTFLDVPPQGQQTPTDFFSSNADAATSLVNAIYSKML
DWNFHSFSWNGITSIVSDDADKGSSPGDTGTDKDQLDNFTFTPSSISFNEVWGGQYEAIA
RANQALDNLPALSINDTLKNRLIGEASFLRAYCYFNLVRSFGGVPLITKVADPTNASDIQ
NGRVRATAAQVYTQIESDLTRAVSSLPEKSQYNAADLGRATKGAAKALLAKVSMYEKKWS
VVQQLTDEIIASGQYSLLPNYGELWRESSENGVESIFEIQGRGVTPNKGVQGYFESQGAR
GENGWGWGFNTPSQSLFNAYETGDTRRDGTIIQKGMTLWDGRVVSANAENPYYNYKAYVS
LSRETNNGDTWETNKNLRMLRYGEVLLMNAEAANELGQSAKALTSLNLVRARARGGATGV
LPNVTTTAQADLRQAIWKERRVEMAFEHDRYFDLVRQGRAATVFQALGKNFVAGKHELFP
IPQPQIQLSGGQLTQNPGY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgatacaaaaaacaattgcgtacggcctcctgagcgggctggtactgaccagt
ggctgttccaaaacgtttctggacgtgccaccccaggggcagcaaacgcccactgatttc
ttttcgagtaatgccgatgccgctaccagtctggtcaatgccatctactcaaaaatgctt
gactggaacttccactcgttttcgtggaatggcataaccagcatcgtctccgacgacgcc
gacaaaggcagctcgccgggcgacaccggtaccgacaaagatcagctcgacaactttacg
tttacgccgtcgagcatttcgttcaacgaggtgtggggtgggcaatacgaagcgattgcg
cgggccaatcaggcgcttgataatctgcccgccctgagcatcaacgacacgctgaagaac
cggctcattggcgaagccagcttcctgcgggcctactgttatttcaacctcgtgcgctcg
tttggcggggtgccgctcatcacgaaagtggccgacccaaccaacgccagcgacattcag
aacggacgcgtccgggcaacggcggcacaggtctacacgcagatcgaaagcgacctgacc
cgggccgtaagcagcctgcccgaaaagtcgcagtataacgcggcagacctgggccgggct
acgaaaggagcggccaaagccctgctggcaaaggtgtcgatgtacgagaaaaaatggagc
gtggtacagcagctaaccgatgagatcatcgcatcggggcagtattcgctgctgcccaac
tacggcgaactgtggcgcgaatcgtcggagaacggcgtcgagtcgattttcgagattcag
ggccggggcgtaacgccaaacaaaggggttcagggatatttcgagtcgcagggcgcacgg
ggcgaaaacggctggggatggggcttcaatacgccctcgcagagcctgtttaacgcctac
gaaaccggcgacacccggcgcgacggcacgattattcaaaagggaatgaccctttgggac
ggtcgggtggtcagcgccaacgccgaaaacccgtactacaactacaaggcctacgtcagc
ctgagccgcgagaccaacaacggtgacacctgggaaaccaacaaaaacctgcgtatgctg
cgctacggcgaggtgctgctgatgaacgccgaagcggctaacgagctcggtcagtcggca
aaggcacttacgtcgctgaatctggttcgggcgcgggcgcggggtggtgcaacgggcgta
ctgcccaacgtaacgaccaccgcgcaggccgatttgcggcaggcgatctggaaagagcgt
cgggtcgagatggcgttcgagcacgatcgttatttcgatctggtacggcaggggcgggca
gcaactgtgtttcaggcgctgggcaagaacttcgttgctggcaagcacgaactgtttccc
attccgcagccgcagattcagctcagcggtggccagctgacccagaatccggggtactaa
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