Shewanella rhizosphaerae: K0I63_00090
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Entry
K0I63_00090 CDS
T09262
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00071
Fatty acid degradation
srhs00280
Valine, leucine and isoleucine degradation
srhs00310
Lysine degradation
srhs00362
Benzoate degradation
srhs00380
Tryptophan metabolism
srhs00410
beta-Alanine metabolism
srhs00640
Propanoate metabolism
srhs00650
Butanoate metabolism
srhs00907
Pinene, camphor and geraniol degradation
srhs00930
Caprolactam degradation
srhs01100
Metabolic pathways
srhs01110
Biosynthesis of secondary metabolites
srhs01120
Microbial metabolism in diverse environments
srhs01200
Carbon metabolism
srhs01212
Fatty acid metabolism
Module
srhs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I63_00090 (fadB)
00650 Butanoate metabolism
K0I63_00090 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0I63_00090 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0I63_00090 (fadB)
00310 Lysine degradation
K0I63_00090 (fadB)
00380 Tryptophan metabolism
K0I63_00090 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I63_00090 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0I63_00090 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0I63_00090 (fadB)
00930 Caprolactam degradation
K0I63_00090 (fadB)
Enzymes [BR:
srhs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0I63_00090 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0I63_00090 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0I63_00090 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0I63_00090 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
QYK12972
LinkDB
All DBs
Position
complement(20145..22295)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG
KDAFIVGADITEFLGLFAQDDSVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAVVAPELLETAARQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALELGLNEAAKLL
TAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEAERFGQKNGKGFYQYSVDRRGKP
KKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTEKMRELAATNGSYYPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaataagtttgatcgagagaccctcaactcccttaac
gacgcactcgatgccctagcacaaacccaaggggttaagggcctgatgctcacctcgggc
aaagatgcctttatcgtaggcgccgacatcacagaatttctgggactttttgcacaagac
gacagcgtgctgcagggctggctggaagacgccaacaaggtgtttaacaagctcgaagat
ctgcccttcccaactatctcggccatcaagggcttcgccctgggcggcggttgcgaaact
atcctagccactgacttacgtatcgccgacacctcggcgcgtatcggcctgccagaaact
aagctgggcatcatccctggctttggcggtaccgtgcgtctacctcgcgtgataggtgcc
gacaacgcacttgagtggatcaccacaggtaaggatcaacgcccagaagccgccctcaag
gttggtgccatcgacgccgtagttgctccagaattgctggaaacggcggcacgccagatg
ctgcaagatgccatcagcgagaagattgactggcaagcccgtcgtcagcgcaagctgtca
ccgctgaccctacctaagctggaagccatgatgtcatttgccaccgccaagggcatggta
ttcaaggttgccggtaaacactatcctgcacctatggctgttgtcgaggtgatcgagaag
gccgccttgagcgagcgcgccgaggctcttcaggtagaacatcaggccttcatcaagctg
gccaagacagacgtagccaaggcgcttatcggtatcttccttaacgaccaactagttaaa
ggcaaggccaagaaagcagccaaacaggcacaagcggttaactccgccgccgtgctgggc
gcaggcatcatgggtggcggtatcgcctaccagagcgccagcaagggcacgcctatcgtg
atgaaagatatcaatcaggcggcactggagcttggcctcaacgaggcagccaagctgctc
acggcgcagatcaatcgtggtcgctcgacgccagctaagatggcgggcgtactcaacaac
atcacggcaactctggactacaacgcactaaagcaagccgatgtcgtggtcgaagccgtg
gtggaacatcctaaggtgaaggcgaccgtactggcagaagtcgagcaggtcgtgggcgaa
gatgccatcatcacctctaacacctccaccatctcaatcaatctgctggccaagagcctg
cagaaaccagagcgcttctgtggcatgcacttcttcaacccggtacacaagatgccattg
gttgaggtcattcgcggcgagcatagctctgaagagacagttgcctctgtcgtagcttac
gccgccaagatgggcaagacgcctatcgtggtcaacgactgcccaggcttcttcgttaac
cgtgtactcttcccctacttcgccggcttcagcggcctactagaagatggcgccgacttt
gcggccatcgacaaggtgatggagaagcagttcggttggcctatgggccccgcctaccta
cttgacgtagttggtctggacacaggtcatcacgcccaggccgttatggccgaaggcttc
cctgacagaatggcgaaagaaggcaaagacgccatcgacgtcatgtttgaggccgaacgt
ttcggtcagaagaatggcaaaggcttctaccaatattcggtggatcgtcgcggcaagccg
aagaaagaggtcgacccgctcagctatgagttactgggcaacgccttcggtgagcagaag
gagttcagcagcgacgagatcatcgcccgcaccatgatccctatgatcatagaaacggtt
cgttgtctggaagaaggtatcatagccacgccggccgaagccgatatgggactcgtttat
ggactcggtttccctccattcagaggaggtgtgttccgctacctggacaccttaggtgtc
gctaacttcgtcgcccttgccgaccagtacgcccacctgggtggcctgtatcaggtaacc
gagaagatgcgtgaactggctgccaccaacggcagttactacccagcctaa
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