Shewanella rhizosphaerae: K0I63_01100
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Entry
K0I63_01100 CDS
T09262
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00550
Peptidoglycan biosynthesis
srhs01100
Metabolic pathways
srhs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I63_01100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_01100
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
srhs01003
]
K0I63_01100
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
K0I63_01100
Enzymes [BR:
srhs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
K0I63_01100
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I63_01100
Glycosyltransferases [BR:
srhs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K0I63_01100
Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
K0I63_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QYK13151
LinkDB
All DBs
Position
complement(221235..223820)
Genome browser
AA seq
861 aa
AA seq
DB search
MKWFKRITIALFSLALLGIGAIAAAYFYVLPDLPDVTTLKTVKLQTPLRIYSADGKLISQ
FGEKRRIPVEYEQVPQQLINAVLDTEDARFFEHKGIDPIGIIRAAVILATTGKKSQGAST
ITQQVARGFFLSREKTYIRKIKEIFLALKIEQALSKKEILTLYLNRSFLGNRAYGVGAAA
QVYYGKELEELTLPEMAMIAGLPQAPSAANPIRNPARAMNRRNWVLSRMLEKENITQDEY
QEAIRAPITAKYHGAEVELYAPYISEMARDYLVEKLGEEEAYTGGYNVYTTVDSRLQMLA
QEALRNNVYAYDERHGYRGATKVLWDAEGTAKLGETQIVTQLKQTQGFQGLEPAAVTEVA
EQSVKVINAKGETLTLEWEGLKWARKFISNKRQGKAPKTAGEILKAGEQVWIRNNGNIWQ
LSQIPEVASAIVSLDPKDGAIRTLVGGYSFHTSQYNRVTQAKRQLGSNIKPFIYTGALEK
GYTLATLINNAPINNADIRQGTAWRPKNSPDKYTGPTRLRVGLAQSINVMSVRAMRYTGL
ESAIDTLVKFGFDRDDLPQNESLALGSPSVTPLQVVTAFSVFANGGYRVEPYFIDHIDNA
YEQTVEEANPTLACTPELAEPQSQPTDDPFAAMAQELPKHEVANQEKEGIEVASQEANAE
DPSCPSTARHAPQIISKQTAFLITEALKSVIWGGGDWSKGTGWNGTAWRAARVVNRHDIA
GKTGTTNESKDTWFSGFTPTLATTVWVGFDDHSIELGRTAWNTNGAKDQISGAEAGAKTA
GPGWNEFMKNALQGTPELPSPPPEGIVSARIDLATGKLSRKTDYTTKFEYFIQGTEPKEF
ATEAQTQEDIFIDDSVEDLFQ
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtggtttaaacgaattaccatcgctctatttagcctagcccttttgggaataggt
gcaattgctgcggcctatttttatgtgctgccggaccttcccgatgttaccactcttaaa
accgtaaaattgcaaactccattacgaatttacagcgctgatggcaaattaatttcacaa
tttggcgaaaaacgccgcattccagtcgaatatgagcaggtaccgcaacaattaattaat
gcggtgctcgacacagaagacgcccgcttcttcgaacataaggggatcgaccccataggc
atcatacgtgccgcagtgattctggctaccacaggtaagaagagccaaggggcgagtacc
atcacccagcaggttgcccgcggcttcttcctctccagagagaaaacctacattcgtaag
atcaaagagatcttcctggccttgaaaattgagcaagccctgagtaagaaagagatctta
accctctatctcaaccgctctttcctgggtaaccgcgcctacggtgtcggcgccgctgcc
caggtctactacggcaaggaactcgaagagcttaccctgccagagatggccatgatagcc
ggtctgccacaggcaccttctgccgccaaccctatacgcaatccagcccgcgcgatgaat
cgtcgcaactgggtactcagccgtatgctggagaaagagaacattacccaggacgagtat
caggaagcgataagagcccctatcaccgccaagtaccatggcgccgaggtagagctctat
gcaccttatatctcagagatggctcgcgactatctggtcgaaaaactcggtgaagaggaa
gcctataccggcggttacaacgtctataccactgtcgactctcgcctgcagatgctggcc
caggaggctctgcgcaataacgtctacgcctatgacgagcgacacggttatcgcggcgcg
actaaggtgttatgggatgcagaaggcacggccaagctaggtgagacccaaatcgtcaca
cagctgaagcaaacccaaggcttccaagggctcgagcccgcagccgtgaccgaggttgcc
gagcaaagcgttaaggtcatcaatgcgaagggcgaaaccctcaccctggagtgggaaggt
cttaagtgggcgcgcaagttcatcagcaacaagcgtcagggcaaggcgcctaagacggct
ggcgagatcctcaaggcaggcgagcaggtctggatccgcaacaacggcaacatctggcag
ctatcgcaaattcctgaggtggccagcgccatcgtctcgctggatcctaaggatggcgcc
atcaggaccctagtgggcggctacagcttccacaccagccaatacaaccgtgtcacccag
gccaagcgtcagctgggctccaacatcaagcccttcatctatacaggtgcgctggagaaa
ggctacaccctggctacgctgatcaacaacgcgccgatcaacaatgccgacatacgtcag
ggcacagcatggcgacctaagaactcgcccgacaagtatactgggccgacacgcctgaga
gtcggtctggcacagtctattaacgtcatgtcggtacgcgccatgcgctataccggacta
gagagcgctatcgacaccctagtcaagttcggtttcgaccgcgacgatctgccgcaaaac
gaatcactggcgctgggctcaccttcggtgacgccgctgcaggtggtcaccgccttctcg
gtatttgcaaatggcggctaccgggtcgagccttactttatcgaccatatcgacaatgcc
tacgagcagacggtagaagaagccaaccctacactagcctgtacgcctgagttagccgag
ccacagtcgcagccaacggacgatccttttgcagctatggcacaggaactgcctaagcac
gaagtggcaaatcaagagaaagaaggcatagaagtcgcgagccaggaggctaacgccgaa
gatcctagctgtccgagcacggctcggcacgcaccacagatcatcagtaaacagacggcc
ttcctgatcaccgaagccctgaagagcgtaatctggggcggcggcgattggagcaagggc
acaggctggaacggcaccgcctggcgcgccgcccgtgtggtgaaccgccacgatatcgcg
ggtaagacaggtaccaccaacgaatcgaaagatacttggttcagtggcttcacaccgacg
ctggcaactaccgtatgggtcggcttcgacgatcacagcatcgaactgggccgcaccgcc
tggaacaccaacggcgcgaaagatcagatctcgggtgccgaagccggtgccaagaccgct
ggcccaggctggaacgagtttatgaaaaacgccctccaaggcacgcctgagctaccttct
ccgccaccggaagggatagtctcggcccgtatcgacctggccacaggcaagttgagccgt
aagacagactacaccaccaagttcgagtatttcattcagggtaccgagccgaaggaattt
gccaccgaggcgcagactcaggaagatatctttatcgacgattcggtagaagatctgttc
caatag
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