Shewanella rhizosphaerae: K0I63_01600
Help
Entry
K0I63_01600 CDS
T09262
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K0I63_01600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_01600
02044 Secretion system [BR:
srhs02044
]
K0I63_01600
Transporters [BR:
srhs02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K0I63_01600
Secretion system [BR:
srhs02044
]
Type I secretion system
Adhesin protein transporter
K0I63_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_13
AAA_29
AAA_22
MMR_HSR1
DUF87
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QYK13240
LinkDB
All DBs
Position
complement(328182..330362)
Genome browser
AA seq
726 aa
AA seq
DB search
MQASASPKTEQWTVSASQRVTVDPLLDSLVLLTEYFGSPCSSESLAAGLPLSGSILTPEL
VPQAAGRAGLAAKLTRKGLDQISPILLPCILLLKDKNACLLREIDIDKDRAVIQLPETGG
EEELSIEALEAMYVGYLFLVKQQYRGDMGLDLHLHDSRTHWLIQTLKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAYIFDLVMRQLRAYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSIGGMARQLGEFDSIREILTSATITTLVDLPFALFF
MLIIYIVAGDLAIIPVIGGCIIIGYTLLMQPRLKAAIEESNKFSSLKHGHLIESLASIES
IKSSGAEGLVQKSWQQMIGHTANWQLKVKKISTSVTNVANFTVQLSVVCVVILGVYRVAD
NDISMGGIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLDQIMTQEDEFENKGHLVS
KHRLKGQINADHVSFNYPGSERPVLHPMSLSIAPGERIAIIGRNGSGKSTLAKLLVGLYQ
PTKGSLRYDGLDSAQIHPTDLRRNFGYLPQDITLFHGTIRDNILFGTRQVTEHQLIRAVQ
LSGVNQFTDIETEGLDQQVGEGGQSLSRGQRQTIALARATLNDPPVLLMDEPTASLDARA
EKQFIRAMRNVSKERTLLLITHKMHLLNLVDRILVLDRGHLVADGPKEQVLNQLAKGLLS
GGPKSE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcttcagcgtctcccaaaactgaacaatggacagtttcagcctcccaaagagtg
actgtcgatcccttgttagacagtttagtgttattgacagaatacttcggcagcccctgc
tccagcgagtcattagccgctggcctaccgctgtcggggagcattttgacaccagaactt
gtgcctcaggctgccggtcgagccggtttagcagccaagctcacccgtaagggactggat
cagatctcgcctattcttctgccttgtatcttgctcctcaaagataagaatgcctgtcta
ttaagagagatcgacattgacaaagacagggccgtcattcagctaccggaaaccggtggt
gaggaagagctcagcatagaggcgctcgaggccatgtatgtcggctatctgttcctcgtc
aagcagcaataccgtggcgacatgggcttagatctgcatctacacgacagtcgcactcac
tggcttattcagaccctgaaagattcggcgcctatttaccgcgacgccctcatcgcctca
gtgctggttaaccttttcgccctggtgtcccccctgtttatcatgaacgtgtatgacaag
gtggtgcctaacctcgccttcgagtccctatgggtgctagccattggtgccggcatcgcc
tatatcttcgacttagtcatgcggcaactcagggcctacctgatcgacgtcgccggcaag
aaggtcgatatcatagtgtcatcgcggctattcgctaaggctatcggcataccgctagag
aaacgttcccccagcataggcggcatggcgcggcaactgggcgagttcgacagcatacgc
gagatcttaacctcggcgaccatcaccaccctggtcgatctgccgttcgcgctgtttttc
atgttgatcatctatatcgtcgccggcgacctggccatcattcctgtgatcggcggctgt
atcattatcggctataccctactaatgcagcccaggcttaaggcggccatcgaagagagc
aacaagttctccagcctgaaacacggtcatcttatcgagtccctggcctccatcgaatca
ataaaatccagtggcgccgaaggcttagtgcagaagagctggcagcagatgataggtcat
accgccaactggcagctgaaggtgaagaagatctccacctcggtcaccaacgtggccaat
ttcaccgtacagctttctgtggtctgcgtagtgatcttaggggtctatcgcgtcgccgat
aacgacatctctatgggcggcattatcgccgcggttatcctgtcgagccgcgccatctca
cccatggcgcagttggcaggcttgatgacccgaggcaaccataccgccagcgccctaaga
cagcttgatcagatcatgacccaagaggatgagtttgaaaataaaggccatctggtcagc
aaacatcgccttaaagggcagatcaacgccgaccacgtcagctttaattacccaggctct
gagcgacccgtgctgcaccccatgtcgctgtcgatcgccccgggtgagcgcatcgccatc
ataggacgcaacggttcgggcaagagtaccctggccaagctgttggtaggcctatatcaa
ccgaccaagggtagcctgcgctatgacggactggattcggcacagatccatccgacggat
ctgcgtagaaacttcggttacctgccacaggacatcacactgttccacggcacgattcgc
gataacatattgttcggtacccgtcaggtcaccgagcatcagctgatccgtgcggtgcag
ctctctggcgtcaaccagtttaccgatatcgagaccgaaggcttagatcaacaggttggc
gagggtggacaatccctctcccgtggtcaacgccaaaccatcgcgctggcgcgggccacc
ttgaatgacccaccggtactcctgatggatgagccgaccgccagcctggatgcccgcgcc
gagaagcaatttatccgcgccatgagaaatgtctctaaggagcgaaccctgctgctgatc
acccataagatgcacctgctcaacttggtggaccgcatcctggtattagatcgtggccat
ctggtggccgacggtccgaaggagcaggtactcaaccagctcgccaaggggctgttatct
ggagggccgaagagtgagtaa
DBGET
integrated database retrieval system
