Shewanella rhizosphaerae: K0I63_02600
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Entry
K0I63_02600 CDS
T09262
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K0I63_02600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_02600
02044 Secretion system [BR:
srhs02044
]
K0I63_02600
Transporters [BR:
srhs02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K0I63_02600
Secretion system [BR:
srhs02044
]
Type I secretion system
Adhesin protein transporter
K0I63_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QYK13430
LinkDB
All DBs
Position
complement(575024..576691)
Genome browser
AA seq
555 aa
AA seq
DB search
MVKTFRLLAQNQSFNELLLTSVFINLLSLALPFTMLQIYDRILPNEAHGTATVLVIGVAI
AILLELILRYARSWLLGASAANYELHTITRVVKRLINADYHHIENLGAGKISHGIHSIAA
MRDIYSGQAAVAMMDFPFVIIFLALVAYIGGPLVFIPLIVWLIAGVRVWQLGQKLSLATK
ELSLSQDERTRLLMLVLSGLTTTKAMALESRMTYAYKKINHQRLAQQEEVDWLSAKLQEL
IQGTAQATTLCLVMIGCFEVLNGNLTTGGLAACSILAGRAVAPLSAIGSLRAKYVSAKEA
MDQVNALIATPQETFNGQTRYQQKLPLGPIDFESVSAEKTSARLDNISLTIPAGSIATVT
SNPMTHASLLLSTIGAYHQLDSGQIAIAGVPQQDHDGFEYRQSICYVPPWASLFSGSILD
NMTLFRREREASAMLIADQLGLSATLAQLSAGYQTQVGSNENQVLNKGAIKLIALVRALA
QSPSILLLDEPMVSLDADSQARLLQVLAERRGQMTVVIASYFDEVAALSDMQIALGEHGE
LAGQAQGQGKGGART
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaacctttcgtttgctcgcacagaatcagtcgttcaacgaactgctcctcacc
tctgtgtttatcaatctgctttcactcgccctgcctttcaccatgttacagatctacgat
cgtatcttgcccaacgaggcacacgggacggcaacggttcttgtgattggagtcgctatc
gccatcctgttggagctgatactcaggtacgcccgtagctggctgctgggcgcctcggca
gccaactatgagctgcataccatcacccgggttgtgaagcgtctcatcaatgccgattac
caccacatagagaatctcggcgcgggcaaaatctcccacggcatccacagcatagcggcc
atgcgcgacatctactccggccaggcggccgtggcgatgatggatttccccttcgtgatc
atcttcctcgccctggtggcctacattggcgggccgctggtgtttatcccactgatcgtc
tggctgatcgccggcgtgagagtatggcagctggggcagaaactctctctcgccaccaag
gagctaagcctgagccaggatgagcgcacccgcctcttgatgctggtgctctcaggcctc
actaccaccaaggcgatggccctcgagtcccgcatgacctatgcctataagaagatcaat
catcagcgcctcgcccagcaggaggaggtcgactggttgtcggcgaaactacaggagctg
atccagggcaccgcccaggccaccaccttgtgcctggtgatgataggttgtttcgaggtg
ctcaacggtaacctgaccacggggggcttggcggcctgctccatcctggccgggcgcgcc
gtcgcccccttaagcgccatcggcagcctgagggccaaatatgtcagcgccaaggaggcg
atggatcaggtcaatgctttgatcgcgacgccacaggagacctttaacggtcagacccga
tatcaacaaaaactgcccctaggccccatcgacttcgagagcgtcagcgccgagaagacc
agcgcccggctcgacaacatcagcctcaccatacccgcaggcagcatagctaccgttacc
tccaaccccatgacccatgccagcctgctactgagcaccataggcgcctatcaccagctg
gatagcgggcagattgccattgcgggtgtgccgcagcaggatcacgacggcttcgagtac
cgtcaatccatctgctatgttcccccctgggccagcctcttcagcggctccatcttggat
aacatgacgctatttcgccgcgagcgtgaggccagcgccatgctgatcgccgaccaactc
ggcctatcggccaccctggcgcagctgtcggcgggttatcagactcaggtaggcagcaat
gagaatcaggtgcttaacaagggggctatcaagctgatcgccctggtgcgggccctggcg
cagtccccctccatcctgctgctggatgagcccatggtttcactggatgccgactcccag
gcccgcctgctgcaggtgttagccgagcggcgcgggcagatgacggttgtcatcgcctcc
tatttcgatgaggtcgcggcgctgagcgacatgcagatcgcactcggcgagcacggcgag
ctggccggtcaagctcaaggccaaggtaaaggaggagcgcgcacatga
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