Shewanella rhizosphaerae: K0I63_02810
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Entry
K0I63_02810 CDS
T09262
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_02810
Transporters [BR:
srhs02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I63_02810
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
QYK13470
LinkDB
All DBs
Position
complement(621097..624279)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSRILLIILCLISFSGAANSPLNLNKRLGLGQEPQVASKSTAEQLSLLEEQLTEQQALQS
SFDAIIHQYQSQKQALTQQLKEAATPLEYNPNQDLSQQASLSYLRLSELKETEANLATQV
NELIKRQQQLPSLISQANLTLAKHKQATSDDNQPLSEMQRRVYVQSLSTLESELASSQKQ
IALTQQQLALVRSQLVQQEALIERLNGAIAEQRHKATAATIAASQIETSITDDAIAIKLN
AQNQAYGEQLKQLTHEVTNVMTLQEQAETQYQFQAKQITNIQQQIALVKLNSAFGERFLR
ILYSLPKPPSQDKISNEIANARLARYQIEQDQTLHPLLGAAEQLTPLQSKLVGAQKELQR
QLLENYDLYLGELAELRVLYEQLSQQYQTLKTTLNEHLFWVANANSIDGYWLGDLYQSTQ
WLLTQAPWHQVQDSLSEQSTLWSWWVILMVLCLVMQDLVTPKFTQLMAKNVTYVGNVTQD
KFIYSFNTLVGSLLYSCIKPLPLISGGLIFYFSNHNLVSSVGMGILAIGMLYQLYRLTYL
LALDKGLLIGHFKGDKAIIRAGQQRLRALTVLAMPIVGVIGFTEVLETSLVRNSLGRGAF
ILLALMLFWFYRDMLSLSKQEHHYHQDDKNKRLLQKLLWSILILLPPACAVLAFRGYYFT
AYQMLLQLQLSLILSLSFMLLYQLIKRWMLIERRRIAFNRAKAKRAEILAQREKEDDPNS
NEPPDTYEEPVVDLETISSQSLGLVRSLLTLAFLISLIGLWTQTHSAIFSFLDGITLWTS
SSTVDGIAQQIPITLKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTV
SRYLVVFFGMLSGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRI
GDTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVS
VARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLR
HKLHKQVSKKLRENHLELAYPQLEVHISGQSKETQGIIRS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtatattactgattattctctgtctaatctcattctcaggcgccgcaaattcg
cccctgaatctcaataaacgcctgggactaggacaggagcctcaggtcgccagcaagagc
accgccgagcagttgagtctgctggaggagcagctcaccgagcaacaggccctacagtcc
agcttcgacgccatcattcaccagtatcagagccagaaacaggccctgacacagcagctt
aaagaagccgccacgccgctggaatacaaccccaatcaagatcttagtcagcaggcgtca
ctctcctacctgagactatctgagctcaaagagacagaggctaacctggccactcaggtc
aacgagttgatcaaacgccagcagcaactacctagcctgataagccaagccaatctgacc
ctggccaagcacaaacaggcgaccagcgacgacaatcagcccctgagcgagatgcaacgc
cgggtctatgttcagagcctatcgaccctggaatctgagctggccagcagccagaaacag
atcgccctgacccagcagcagttggcgctggtgcgcagccaactggtgcagcaagaagcc
ctgatcgagcgcctcaacggcgccatcgccgagcagcgtcacaaggcaacggcggccacc
atcgccgccagtcagatagaaacctccatcacagacgatgccatcgccatcaagctgaac
gcacagaaccaagcctacggcgagcagctgaaacagctgacccatgaggtcaccaatgtg
atgacactgcaggagcaggccgagacccaataccagttccaggccaagcagatcactaat
attcagcagcagatcgccctggtgaaacttaactcggccttcggcgagcgcttcctgcgt
atcctctactcactgcccaagccgccgagccaggacaagatcagcaatgagatcgccaat
gcccgtctggcccgttaccagatagagcaagaccagacactgcatccgctactcggcgcc
gccgagcagctcacgccgctgcaaagcaagctggtcggtgcccagaaagagctgcagcgt
cagctgctggaaaactatgatctctaccttggcgaactggccgagttaagggtgctgtat
gaacagctgagccagcagtatcagacccttaagaccacgcttaacgagcacctgttttgg
gtagccaacgccaacagcatagacggctactggctgggcgacctgtatcagagcactcaa
tggctgctgacccaggcgccttggcatcaggtacaggactcattaagcgaacagagcacc
ctctggtcctggtgggtgatcttgatggtgctctgcctggtgatgcaggacttggtcacg
cctaaatttactcagctgatggcgaaaaacgtcacctatgtgggtaacgtcacgcaagat
aagtttatctatagtttcaataccttggttggctcgctgctatacagctgcatcaagcct
ctgccgttgatcagcggcggtctgatcttctacttcagcaaccataacctggtctcctcg
gtgggcatgggcatactggccataggcatgctgtaccagctctatcgcctcacctatctg
ctggcgctggataagggcctgttgatcggccacttcaagggcgacaaggcgatcatacgc
gccggtcagcaacgcctgcgcgccctgaccgtattggcgatgccgattgtcggcgtgatc
ggcttcaccgaggtgctagagacttcgctggtgcgcaacagcctgggacgcggcgccttc
atcctgctggccctcatgctgttctggttctaccgcgacatgctgagcctgtcgaagcag
gaacatcactatcaccaagacgataagaacaagcgcctgctgcagaaactgctctggtcg
atacttatcttactgccaccagcctgcgccgtgctggccttcaggggctactacttcacc
gcctatcagatgctgctgcagctacagctgtcgctgatcttatccctaagcttcatgctg
ctgtatcagctgattaagcgctggatgttgatcgagcgacgccgcatcgcctttaaccgc
gccaaggccaagcgcgccgagatcttggcccagcgggagaaagaagatgaccccaacagt
aacgagccgccggacacctatgaggagcctgtggtggatctcgagaccatctccagccag
tcgctggggctggtgcgttcactgctgacgctggccttcctgatcagcctgatcggcctc
tggacccagacacatagcgccatcttctcgtttttggacggcattactctgtggaccagc
tcgagcacggtcgacggtatcgcccagcagatccctatcactctcaagtccctgctgctt
ggccttatcatcgtcggcttctcgctgatgatagccaccaacctgccgggtctgctggag
ctgatgattctgcaacgattggatctcacccagggcacgggctttgccatcaccactgtg
agtcgctatctggtggtcttcttcggtatgctcagcggcttttcgaccctggggatggag
tggtctaagctgcaatggctggtcgcggcgctctcggtgggcttaggtttcggtctgcag
gagatctttgccaacttcatctcgggcctgatcatcttgttcgagaagccggtgcgtata
ggcgataccgtcaccattcgcgagctgaccggtacggtaagtaagatccagatccgcgcc
accacaattgtcgactgggacagaaaagagataatcgtccccaacaaggcctttattacc
gagcagctgatcaactggtcgctgtcagacccgataactagggtgattgtctatgtctcg
gtcgccagggactcggatcccgcgcgagtcgaggcggcgctctatcaggcggttaaggag
tgtgacgatgccctgaccacgccggagcccgaggtctggtttgccggatttggtcagcat
actcaggactacgagatccgcgcctatgccaaggatatgaacacccgctggccgctacga
cacaagctacacaagcaggtcagcaagaaactgagagagaatcatctggagctcgcctat
ccgcagctcgaggtgcatattagtggtcaaagtaaagagactcaggggataattagaagc
taa
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