Shewanella rhizosphaerae: K0I63_02990
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Entry
K0I63_02990 CDS
T09262
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs02020
Two-component system
srhs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0I63_02990 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0I63_02990 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srhs03000
]
K0I63_02990 (crp)
Transcription factors [BR:
srhs03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
K0I63_02990 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
HTH_24
HTH_28
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_11
HTH_36
GntR
TrmB
HTH_7
HAV_VP
Motif
Other DBs
NCBI-ProteinID:
QYK13498
LinkDB
All DBs
Position
complement(656984..657619)
Genome browser
AA seq
211 aa
AA seq
DB search
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSS
QMAYRLQSTSQKVGDLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctctgattggtaagcctaaacctgatccaacgttggaatggtttttatcacactgt
cacattcataagtacccagccaaaagcactctgatccatgcgggtgaagactctgacacg
ctgtactacatagtgaagggttctgttgccgtcttgattaaagatgaagaaggcaaagag
atgatcctctcttacctgaaccaaggtgacttcatcggtgaattgggtctgtttgaagag
caagccgagcgtaccgcttgggttcgtgccaagcaagcctgtgaaatcgctgagatctct
tacaagaaatttaagcagctgatccaggttaaccctgagatcctgatgaagctctcttct
cagatggcttaccgcctgcaaagcaccagccagaaagtgggcgaccttgccttcctggac
gttgccggtcgcatcgcgcagacgctactgcacctggctaagcaaccagatgccatgacc
catccagacggtatgcagatcaagatcactcgccaagagattggtcagatcgtgggttgt
tctcgcgaaaccgttggccgtatcctcaagatgcttgaagagcagaatctgatccaagca
cacggcaaaactatcgtggtttacggtacccgctaa
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