Shewanella rhizosphaerae: K0I63_04720
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Entry
K0I63_04720 CDS
T09262
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhs03009
]
K0I63_04720
Enzymes [BR:
srhs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K0I63_04720
Ribosome biogenesis [BR:
srhs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0I63_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6052
Motif
Other DBs
NCBI-ProteinID:
QYK13823
LinkDB
All DBs
Position
1040485..1041195
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AA seq
236 aa
AA seq
DB search
MSAKRARLDRFISQHCQIPRKQVRLILAKGRVSVDGQVVRDADCQIDQFSQVMLDGQALR
HEQPIYLMLHKPVGVVSATKDDEHRTVMDLLPDYKDKGLHIVGRLDLNTSGLLLLTNDSR
WSKRIMSPEHKVAKQYLVTLKAPLTQAYVKAFAEGFYFAFENITTQPALLEILEPHLARV
TLHEGRYHQIKRMFGRLRNQVMALHRLSVGNLILDETLAVGEYRPLTPLELASIFG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaacgcgccaggctggatcgttttatcagtcagcattgtcagatcccccgc
aagcaggtgcgcctcatcctggcaaagggccgggtgagtgtcgacggtcaggtggtacgg
gatgcagactgtcagatagatcaattctctcaagtgatgctcgatggccaggcgttgagg
catgagcagcccatatatctcatgctgcataagccggttggtgtggtgagtgcgaccaag
gacgatgagcacaggacggtgatggatctcttgcccgactataaggacaaggggctacat
atcgtcggacggctggatctcaacacctcgggtttgctgctacttaccaacgacagtcgc
tggtcgaagcgtatcatgtcgccggagcataaggtggccaagcagtatctggtcaccctc
aaggctcctctcactcaggcctatgtgaaggcctttgccgagggcttttactttgctttt
gagaatattaccactcagccggccttgcttgagatcctcgaaccccatctggccagggtc
accctgcatgagggacgctaccatcaaattaagcgcatgtttggccgcttacgcaatcag
gtgatggcgctgcacaggctctccgtgggtaacctaatcctggatgaaaccttggctgta
ggggagtatcgtccgctgacgccactggagctggctagcatattcggctaa
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