Shewanella rhizosphaerae: K0I63_05285
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Entry
K0I63_05285 CDS
T09262
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srhs03000
]
K0I63_05285 (nhaR)
Transcription factors [BR:
srhs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0I63_05285 (nhaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QYK13932
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All DBs
Position
1187776..1188684
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AA seq
302 aa
AA seq
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MSHLNYNHLYYFWMVHKKGSVAKAAETLCLTPQTVTGQIRVLEQRLNGTLFKRVGRNLEP
TELGELVFRYADKMFSLSYEMLDILNYQKDNNILFEVGIADALSKALASRVLLSVVPSDG
SMHLACYEATHESLMERLRAHKLDMILSDCAGESLKYPEILSKKLGECGVAFFSSTTYDK
PFPACLEEGKLLIPGKRTSLGQQLHHWFDENGLDVTILGEFDDAAMMKAFGFFKQGIFVA
PSIYKQDILAHDMQILGETDDIKEVYHVMFAERMIQHPAVKSLLETDFSDLFAGKDLEVE
RL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatctgaactataaccatctctattatttctggatggtgcataagaagggctcg
gtggccaaggccgccgaaactttatgtttgaccccgcaaacggtaaccgggcagatccgc
gtactcgagcagcgcctcaacggtaccctgttcaagcgggtggggcgtaatctcgagccc
accgagctgggtgaactggtgtttcgctacgccgataagatgttcagcctcagctatgag
atgttagatatcctgaattatcaaaaggataacaatatcttgttcgaggtgggtatcgcc
gatgcgctctctaaggccctggccagtcgggtgctgctttcggttgtgcccagcgatggc
tccatgcatctagcctgttatgaggcgacccacgagagcctgatggagcgcttaagggcc
cataagctggatatgatcttatccgactgcgccggtgagtcgctcaagtatccggagatc
ctatcgaagaagctcggcgagtgcggcgtggcgtttttctcctcgaccacctatgacaaa
ccctttcccgcctgtctggaggagggcaagttgttgatcccggggaaacgtacctcgctc
ggtcagcagttacatcactggttcgatgagaatggcctagatgtcaccatactaggtgag
ttcgatgatgcggccatgatgaaggcgtttggcttcttcaagcaggggatcttcgtggcg
ccctctatctataagcaggatattctcgcccacgacatgcagattctgggtgagactgac
gacatcaaggaggtctaccatgtgatgtttgccgagcggatgatccaacatccggcggta
aaatccctgctggaaaccgactttagcgatctcttcgccggtaaggatctcgaggtggag
cggctataa
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