KEGG   Shewanella rhizosphaerae: K0I63_05335
Entry
K0I63_05335       CDS       T09262                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
srhs  Shewanella rhizosphaerae
Pathway
srhs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:srhs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    K0I63_05335 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srhs03019]
    K0I63_05335 (rnc)
   03009 Ribosome biogenesis [BR:srhs03009]
    K0I63_05335 (rnc)
   03036 Chromosome and associated proteins [BR:srhs03036]
    K0I63_05335 (rnc)
Enzymes [BR:srhs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     K0I63_05335 (rnc)
Messenger RNA biogenesis [BR:srhs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K0I63_05335 (rnc)
Ribosome biogenesis [BR:srhs03009]
 Eukaryotic type
  90S particles
   RNase
    K0I63_05335 (rnc)
 Prokaryotic type
  rRNA processing factors
   K0I63_05335 (rnc)
Chromosome and associated proteins [BR:srhs03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     K0I63_05335 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DnaG_cat_HB DND1_DSRM
Other DBs
NCBI-ProteinID: QYK13941
LinkDB
Position
1196931..1197608
AA seq 225 aa
MEPIKNLPRLGRILGYQFQQIALLEQALTHRSAASKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADAMEAI
IGAIYLDADIETCRTLVLNWYKSRLAVIEPVNQKDPKTLLQEHLQGFKQPLPVYTVVNIS
GEAHAQTFTVECKVEQLKEAVIGVANSRRKAEQIAAAEVLERIKK
NT seq 678 nt   +upstreamnt  +downstreamnt
atggaacccattaagaatctaccgcgtttgggtagaatattaggttatcaatttcagcag
atcgcgctgctggagcaggcgttaactcaccgcagtgcggcgagcaagcataacgaaaga
ctggagtttttaggcgactctattctctctatcgtcatctctgacgccttgtatcatcag
tttcccaaggcgaccgagggtgacctgagccggatgcgcgccaccctagtgtgtggcaag
atgctagccgagatcgccaaggagtttaagcttggcgattatcttaagctgggccctggt
gagctcaaaagcggtggttttcgccgcgagtctatcctggccgacgccatggaggcgatc
ataggcgccatctatctggacgccgatatcgagacctgtcgcactttagtactaaactgg
tataagagccgtcttgcggtgatcgagccggtcaatcagaaagatcccaagaccctgctg
caggagcacctgcagggatttaagcagccgctccctgtctatactgtggtgaacatcagc
ggcgaagcccatgcgcaaaccttcaccgtggagtgtaaggtggagcagctaaaagaagcc
gttatcggcgtggccaattcccgcagaaaggcggagcagattgccgcagcagaagtgttg
gagcgtattaagaaatga

DBGET integrated database retrieval system