Shewanella rhizosphaerae: K0I63_05515
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Entry
K0I63_05515 CDS
T09262
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_05515
Transporters [BR:
srhs02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I63_05515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Porin_4
Phenol_MetA_deg
OprF
TSP_3
Opacity
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QYK13976
LinkDB
All DBs
Position
complement(1235243..1236346)
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AA seq
367 aa
AA seq
DB search
MMNNTLKAILLTSMLPFAANAAQELTPWYVGGGLGVNNYEPNCDQKTMKQCGEDDPYAWD
VFGGYLFNDYFGVELGYRDLGRAEWVDYANNLNDVGARGMTLGLVGFWPFADRWSLSAEA
GAMNYLLSNNKQWGSEYYSDSGVAPYFGAGIGYNFTDNLKLQAKYRRYENLDEDKWNTLE
MESNYWGLELSYRFGRAAPAAVAAPVVVAPKDSDNDGVTDDKDQCANTPSNHKVDANGCT
VYREVTEKHELGSIRFANNSAVVNSASYGQIEKLANYMNQNPRATVLIGGHASNVGNPDY
NMDLSERRANAVAELLVSKYGISQDRVSAKGYGITQPLIEGKSAEANKANRRIEAHVTGV
RKEPVLK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacattgaaagctattctgcttacatcaatgctcccatttgcagccaat
gcagcacaagaactcaccccttggtatgtcggtggcggtttaggcgttaacaactacgag
cctaactgcgatcagaagaccatgaagcagtgtggtgaagacgatccttatgcttgggac
gtatttggtggttacctctttaacgactatttcggtgtcgagctaggctatcgtgaccta
ggccgtgccgagtgggtcgactatgccaacaatcttaacgacgtcggtgctcgcggtatg
acactcggcctggtaggtttctggccatttgccgaccgttggagcctgtctgccgaagcg
ggtgcaatgaactacctactgtcgaacaacaaacagtggggtagcgagtactacagcgac
agcggtgttgcaccatactttggtgcgggtatcggctacaacttcaccgacaacctcaag
ctgcaagccaagtatcgtcgttatgaaaatctcgacgaagacaagtggaacacacttgag
atggaaagcaactactggggtcttgagctgagctaccgcttcggtcgcgcagcaccagcc
gctgtagcagcacctgtggttgttgcaccaaaagattcagacaacgacggtgtaaccgac
gacaaagaccaatgtgccaacacgccaagcaaccacaaggttgatgccaatggttgtacg
gtttaccgcgaagtcaccgaaaagcatgaactaggttcaattcgctttgccaacaactca
gccgtggttaactctgcatcttacggtcaaatcgaaaagttggccaactacatgaaccaa
aacccacgcgcaaccgtgttgatcggtggtcacgcctctaacgtaggtaacccagactac
aacatggatctgtctgagcgtcgtgccaatgccgttgccgagctgctggttagcaagtac
ggtatcagccaagatcgcgtcagcgctaaaggttacggtatcactcagcctctgatcgaa
ggcaaaagcgccgaagccaacaaggctaaccgccgcatcgaagcccacgtcacaggcgtg
cgtaaagagccggttctaaagtaa
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