Shewanella rhizosphaerae: K0I63_05935
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Entry
K0I63_05935 CDS
T09262
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00500
Starch and sucrose metabolism
srhs01100
Metabolic pathways
srhs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
K0I63_05935 (glgX)
Enzymes [BR:
srhs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
K0I63_05935 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
QYK14054
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Position
1330580..1332781
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AA seq
733 aa
AA seq
DB search
MRLTHGKPYPLGATLDSEGVNFALFSAHATAVYLCLFDEEDREVARLRLERQSQQIWHGH
VSGLRAGCRYGYRVDGPYQPLIGHRFNVNKLLLDPYARRLSGAIEDHKSHYGYQFGHEQE
DLSFCELDNAERMPKCVVVDLDNLRPITPLVNPFDQSDSPLSLRRSVIYELHVKGFSQQN
PEVASERRGRFAGLGDPASLQYLKSLGVTAVELLPVQQFVTEAFLQQKGLTNYWGYNTIG
YFAPHQAYLSESISESEGDGAIEEFRDMVSALHGAGIEVILDVVYNHSAEGNRLGPTYSF
KGIDNLSYYRLHPSEPRYYINDTGCGNTLNLSHPRVLQLVMDSLRYWVEVMGVDGFRFDL
ASTLGREDHGFDVGSGFFDAISQDPVLSRVRLIAEPWDIGPGGYQLGQFPIGWSEWNDRY
RDTVRRFWRGDAGMLPEFATRFHGSSDLFEHAGRKPAASINFITSHDGFTLMDLVSYRHK
HNQANGEQNRDGHNENYSDNYGHEGQSDELALTALRARQSRNMLTTLFMSQGVPMLLAGD
EVGHSQLGNNNAYCQDNPASWLDWRIDIDSDELLSFTTNLIKLRRRFPMLCHRDYIHESA
NHTSPGLDWFCRQGEPMTKAHWGEAQTRTLSLVISGELEAQAGCRQALLLMFNADNRTQQ
FTLPSLEGIVQWQCLLSTQDSPQYGESASYQALLQGASLVLQDRSLMIYYAQFTSSAGEP
SAREMPSAKGESR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgacccacggcaagccttatcccttgggggcaaccttagatagcgagggggtg
aacttcgcgctgttttccgcccacgccactgccgtctacctctgtctgtttgacgaggag
gatagggaggtggccaggctacgcctcgagcgtcagtcccagcagatctggcacggccat
gtgtctgggctcagggcgggttgccgctacggctaccgggtcgatggcccctatcagccc
ttgattggccacagatttaatgtcaacaagctgctgctggacccctatgccaggcgcctg
agtggcgccatcgaagatcataaatcccactacggctatcagtttggtcacgagcaggaa
gacttaagtttttgcgagctggataacgccgagcggatgcccaagtgtgtggtggtggat
ctcgacaaccttaggcccataacgcccctagtgaatcccttcgatcagagtgacagcccg
ctgtccctgcgtcgcagcgtgatctacgagctgcatgtgaagggctttagccagcaaaat
cccgaggtggccagtgagcgtcgtggccgcttcgctggccttggcgaccctgctagcctg
cagtacctgaaaagcctcggggtcacagccgtcgagcttctgcccgtgcagcagtttgtt
accgaggccttcctgcaacagaaggggctgaccaactactggggctataacaccataggc
tatttcgcgccccatcaggcctacctaagcgagtcaataagcgagtctgagggcgatgga
gcgatagaggagtttcgcgacatggtcagcgccctgcacggcgccggcatagaggtgatc
ctggatgtggtctacaaccatagcgccgagggcaatcgtctcgggcccacctacagcttt
aaggggatagacaacctcagctactaccgtctccaccccagcgagccgcgctactacatc
aatgataccggctgtggcaacaccctcaacttgtcccatcccagagtgttgcagttggtg
atggactcgctgcgctactgggtcgaggtaatgggagtcgacggcttcaggttcgatctg
gccagcaccctggggcgggaggaccacggcttcgatgtcggttccggcttcttcgatgcc
atcagccaggatcctgtgctcagccgggtgcgtctcatcgccgagccctgggacataggc
cctggtggctatcagctggggcagttccccatcggctggagcgagtggaacgacaggtat
cgcgatacggtgcgccgcttctggcgcggcgatgccggcatgttgcccgagttcgccacc
cgttttcatggatccagcgatctgttcgaacacgccgggcgcaagcccgccgccagcatc
aattttatcaccagccatgacggctttaccctgatggatctggtgagctatcgccacaag
cacaatcaggctaacggcgagcagaatcgcgacggccacaatgagaactacagcgacaac
tatggccacgagggccaaagcgacgagctggcgctcaccgcactgcgtgcccgccagagc
cgcaacatgctcaccacactgtttatgtctcagggggtgcccatgctgctggccggcgat
gaggtgggtcatagccagctgggcaacaacaacgcctattgccaggacaaccccgccagc
tggctcgattggcgcatagatatcgacagcgacgaactgctgagtttcaccactaacctc
atcaagctgcgccgccgcttccccatgctgtgccacagagactatatccacgagagcgcc
aaccatacctccccaggcctcgactggttctgtaggcagggcgagcccatgaccaaggcc
cactggggcgaggcgcagacccgcacccttagccttgtgatcagcggcgagttggaggcc
caggccgggtgccgtcaggcgctgctgctgatgtttaatgccgataacaggactcagcag
ttcaccctgccgagcctcgaggggatagtgcagtggcagtgtctgctcagtacccaagac
agcccccagtatggcgagtccgccagctatcaggccttgctgcaaggcgccagtctggtg
ctacaggaccgtagcctgatgatctattacgcccaatttacctcgtccgcaggagagccc
tcagcgagagaaatgccctcggcaaaaggagagtctagatga
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